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ELOVL4
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:176.7 nTPM
GTEx:176.7 nTPM
FANTOM5:81.4 Scaled Tags Per Million
Pig:79.0 nTPM
Mouse:521.4 nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 176.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 176.7
Samples: 105

Max nTPM: 345.2
Min nTPM: 72.7
Std nTPM: 54.7
Median nTPM:
490_1 67 years, female 345.2
415_1 77 years, female 316.5
162_1 79 years, female 304.4
32_1 67 years, male 295.9
126_1 63 years, male 293.2
149_1 88 years, male 283.6
466_1 57 years, female 278.3
43_1 64 years, female 260.2
491_1 89 years, female 253.4
495_1 57 years, female 250.3
81_1 67 years, male 249.4
6_1 73 years, female 249.1
142_1 61 years, female 247.6
414_1 84 years, female 243.4
468_1 89 years, male 241.4
217_1 76 years, male 239.6
153_1 70 years, female 237.2
117_1 61 years, male 232.9
9_1 66 years, female 226.4
266_1 85 years, male 223.2
2_1 77 years, female 218.8
315_1 62 years, female 217.3
89_1 63 years, male 214.1
526_1 61 years, male 211.4
137_1 83 years, male 210.3
18_1 88 years, male 209.3
139_1 64 years, female 208.1
115_1 83 years, male 205.6
35_1 74 years, female 205.3
499_1 55 years, female 203.3
246_1 77 years, male 199.5
352_1 62 years, male 199.0
389_1 86 years, female 198.9
42_1 85 years, male 198.6
324_1 76 years, male 193.8
265_1 87 years, male 193.2
251_1 78 years, male 192.1
307_1 66 years, female 191.8
99_1 64 years, male 190.7
109_1 81 years, female 188.8
145_1 84 years, male 187.6
347_1 72 years, male 182.7
119_1 70 years, female 182.3
229_1 69 years, female 181.9
120_1 70 years, female 181.6
518_1 75 years, female 180.0
17_1 71 years, male 178.5
413_1 59 years, female 177.9
311_1 78 years, male 176.8
254_1 77 years, female 176.1
503_1 68 years, male 174.6
447_1 81 years, male 168.2
517_1 88 years, male 167.9
425_1 59 years, female 164.6
316_1 62 years, male 163.6
355_1 70 years, female 163.6
348_1 84 years, male 163.2
313_1 79 years, female 160.8
335_1 73 years, female 160.0
292_1 71 years, male 159.3
291_1 76 years, male 159.1
480_1 63 years, male 157.1
237_1 82 years, male 156.3
396_1 62 years, male 155.9
354_1 81 years, female 155.7
243_1 75 years, male 155.3
375_1 74 years, female 155.0
286_1 68 years, female 153.0
4_1 88 years, female 152.6
189_1 76 years, male 152.6
405_1 91 years, male 151.4
350_1 84 years, female 146.3
386_1 76 years, male 145.2
288_1 66 years, female 143.9
377_1 82 years, female 141.2
172_1 72 years, female 141.0
404_1 82 years, female 140.7
293_1 68 years, female 137.6
319_1 81 years, male 134.4
321_1 62 years, female 134.1
322_1 76 years, male 134.0
394_1 75 years, female 130.3
349_1 83 years, male 127.7
406_1 79 years, male 127.1
353_1 82 years, female 123.3
379_1 60 years, male 123.2
314_1 67 years, male 121.4
356_1 87 years, female 121.2
318_1 68 years, male 120.9
320_1 89 years, female 120.8
376_1 75 years, female 120.5
308_1 70 years, female 119.3
501_1 88 years, male 118.7
317_1 60 years, male 115.8
384_1 83 years, male 115.1
264_1 73 years, female 108.5
41_1 94 years, female 107.2
351_1 91 years, male 106.9
177_1 74 years, male 103.3
173_1 67 years, male 101.3
218_1 71 years, female 100.7
163_1 78 years, male 95.5
295_1 61 years, female 93.0
506_1 65 years, male 81.4
452_1 88 years, female 72.7
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 81.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 81.4
FF:10030-101E3 24-65 years, mixed 81.4

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 79.0
Pig sample Sample description nTPM
Retina
nTPM: 79.0
Samples: 4

Max nTPM: 89.1
Min nTPM: 71.3
Sample A Female 71.3
Sample B Female 89.1
Sample C Male 83.4
Sample D Male 72.3

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 521.4
Mouse sample Sample description nTPM
Retina
nTPM: 521.4
Samples: 4

Max nTPM: 579.8
Min nTPM: 498.6
Sample A Male 498.6
Sample B Male 502.4
Sample C Female 579.8
Sample D Female 504.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.