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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 345.2
Min nTPM: 72.7
Std nTPM: 54.7
Median nTPM:
490_1
67 years, female
345.2
415_1
77 years, female
316.5
162_1
79 years, female
304.4
32_1
67 years, male
295.9
126_1
63 years, male
293.2
149_1
88 years, male
283.6
466_1
57 years, female
278.3
43_1
64 years, female
260.2
491_1
89 years, female
253.4
495_1
57 years, female
250.3
81_1
67 years, male
249.4
6_1
73 years, female
249.1
142_1
61 years, female
247.6
414_1
84 years, female
243.4
468_1
89 years, male
241.4
217_1
76 years, male
239.6
153_1
70 years, female
237.2
117_1
61 years, male
232.9
9_1
66 years, female
226.4
266_1
85 years, male
223.2
2_1
77 years, female
218.8
315_1
62 years, female
217.3
89_1
63 years, male
214.1
526_1
61 years, male
211.4
137_1
83 years, male
210.3
18_1
88 years, male
209.3
139_1
64 years, female
208.1
115_1
83 years, male
205.6
35_1
74 years, female
205.3
499_1
55 years, female
203.3
246_1
77 years, male
199.5
352_1
62 years, male
199.0
389_1
86 years, female
198.9
42_1
85 years, male
198.6
324_1
76 years, male
193.8
265_1
87 years, male
193.2
251_1
78 years, male
192.1
307_1
66 years, female
191.8
99_1
64 years, male
190.7
109_1
81 years, female
188.8
145_1
84 years, male
187.6
347_1
72 years, male
182.7
119_1
70 years, female
182.3
229_1
69 years, female
181.9
120_1
70 years, female
181.6
518_1
75 years, female
180.0
17_1
71 years, male
178.5
413_1
59 years, female
177.9
311_1
78 years, male
176.8
254_1
77 years, female
176.1
503_1
68 years, male
174.6
447_1
81 years, male
168.2
517_1
88 years, male
167.9
425_1
59 years, female
164.6
316_1
62 years, male
163.6
355_1
70 years, female
163.6
348_1
84 years, male
163.2
313_1
79 years, female
160.8
335_1
73 years, female
160.0
292_1
71 years, male
159.3
291_1
76 years, male
159.1
480_1
63 years, male
157.1
237_1
82 years, male
156.3
396_1
62 years, male
155.9
354_1
81 years, female
155.7
243_1
75 years, male
155.3
375_1
74 years, female
155.0
286_1
68 years, female
153.0
4_1
88 years, female
152.6
189_1
76 years, male
152.6
405_1
91 years, male
151.4
350_1
84 years, female
146.3
386_1
76 years, male
145.2
288_1
66 years, female
143.9
377_1
82 years, female
141.2
172_1
72 years, female
141.0
404_1
82 years, female
140.7
293_1
68 years, female
137.6
319_1
81 years, male
134.4
321_1
62 years, female
134.1
322_1
76 years, male
134.0
394_1
75 years, female
130.3
349_1
83 years, male
127.7
406_1
79 years, male
127.1
353_1
82 years, female
123.3
379_1
60 years, male
123.2
314_1
67 years, male
121.4
356_1
87 years, female
121.2
318_1
68 years, male
120.9
320_1
89 years, female
120.8
376_1
75 years, female
120.5
308_1
70 years, female
119.3
501_1
88 years, male
118.7
317_1
60 years, male
115.8
384_1
83 years, male
115.1
264_1
73 years, female
108.5
41_1
94 years, female
107.2
351_1
91 years, male
106.9
177_1
74 years, male
103.3
173_1
67 years, male
101.3
218_1
71 years, female
100.7
163_1
78 years, male
95.5
295_1
61 years, female
93.0
506_1
65 years, male
81.4
452_1
88 years, female
72.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.