HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.7 nTPM
HPA:50.7 nTPM
GTEx:49.6 nTPM
FANTOM5:78.5 Scaled Tags Per Million
Pig:120.0 nTPM
Mouse:77.9 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027158Antibody HPA027209
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.7
Sample id Sample description nTPM
Hippocampus
nTPM: 49.7
1898 Male, age 80, left hemisphere 52.0
1911 Female, age 85, right hemisphere 51.9
1855 Male, age 76, left hemisphere 49.4
2529 Female, age 94, left hemisphere 48.6
2621 Female, age 67, right hemisphere 48.2
2148 Female, age 91, left hemisphere 48.0
Dentate gyrus
nTPM: 48.7
1927 Female, age 91, both hemispheres 54.8
2530 Female, age 94, left hemisphere 51.3
2010 Male, age 76, both hemispheres 48.0
2246 Female, age 85, both hemispheres 46.9
2531 Female, age 67, both hemispheres 45.8
2528 Male, age 74, both hemispheres 45.6
Entorhinal gyrus
nTPM: 46.7
1938 Female, age 85, left hemisphere 52.8
2117 Female, age 91, right hemisphere 47.4
2686 Male, age 75, right hemisphere 47.1
2764 Male, age 80, right hemisphere 46.9
1787 Male, age 76, left hemisphere 44.9
2613 Female, age 94, left hemisphere 41.3
Hippocampus, CA1
nTPM: 50.7
2045 Male, age 76, both hemispheres 53.3
1873 Female, age 85, both hemispheres 53.2
2749 Male, age 80, left hemisphere 52.2
2527 Male, age 74, both hemispheres 50.5
2082 Female, age 91, right hemisphere 44.6
Hippocampus, CA2
nTPM: 48.8
1963 Male, age 80, left hemisphere 53.9
1892 Male, age 76, both hemispheres 51.3
2113 Female, age 91, right hemisphere 47.8
2249 Male, age 74, both hemispheres 47.3
1940 Female, age 85, left hemisphere 46.5
2437 Female, age 94, left hemisphere 45.9
Hippocampus, CA3
nTPM: 46.5
1891 Female, age 85, both hemispheres 52.6
2137 Male, age 80, left hemisphere 50.3
1867 Male, age 76, both hemispheres 48.1
2436 Male, age 74, both hemispheres 44.7
2861 Female, age 67, both hemispheres 42.1
2620 Female, age 94, left hemisphere 41.4
Parahippocampal cortex
nTPM: 47.2
1850 Male, age 80, both hemispheres 55.9
1933 Female, age 85, both hemispheres 50.9
2532 Female, age 72, left hemisphere 48.0
2245 Female, age 91, both hemispheres 47.9
2692 Male, age 74, both hemispheres 47.8
1990 Female, age 91, right hemisphere 45.9
2018 Male, age 76, both hemispheres 44.4
2622 Female, age 67, right hemisphere 44.1
2693 Female, age 94, both hemispheres 44.0
2250 Female, age 67, right hemisphere 42.9
Perirhinal gyrus
nTPM: 50.3
1841 Female, age 85, right hemisphere 52.2
2848 Male, age 76, right hemisphere 52.1
1794 Male, age 80, right hemisphere 52.0
1847 Female, age 91, left hemisphere 50.1
2521 Female, age 94, right hemisphere 45.0
Subiculum
nTPM: 46.1
2729 Female, age 91, right hemisphere 47.3
1901 Male, age 80, both hemispheres 46.7
1977 Female, age 85, both hemispheres 46.5
2438 Female, age 94, left hemisphere 46.3
2042 Male, age 76, both hemispheres 45.8
2619 Male, age 74, both hemispheres 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.6
Samples: 197

Max nTPM: 72.1
Min nTPM: 29.8
Std nTPM: 6.8
Median nTPM: 50.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 72.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 66.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 65.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 64.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 64.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 63.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 63.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 62.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 62.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 62.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 59.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.5
FF:10153-102I9 76 years, female 80.7
FF:10169-103B7 60 years, female 76.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 120.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 120.0
Samples: 4

Max nTPM: 155.7
Min nTPM: 91.4
Sample A Female 155.7
Sample B Female 129.0
Sample C Male 91.4
Sample D Male 103.7
Entorhinal cortex
nTPM: 63.3
Samples: 4

Max nTPM: 77.7
Min nTPM: 51.4
Sample A Female 59.5
Sample B Female 77.7
Sample C Male 64.6
Sample D Male 51.4
Subiculum
nTPM: 63.1
Samples: 4

Max nTPM: 83.3
Min nTPM: 55.0
Sample A Female 83.3
Sample B Female 58.1
Sample C Male 55.9
Sample D Male 55.0
Ventral hippocampus
nTPM: 100.2
Samples: 4

Max nTPM: 129.5
Min nTPM: 75.9
Sample A Female 129.5
Sample B Female 75.9
Sample C Male 77.2
Sample D Male 118.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.4
Samples: 4

Max nTPM: 70.2
Min nTPM: 63.3
Sample A Male 65.8
Sample B Male 63.3
Sample C Female 66.2
Sample D Female 70.2
Hippocampal formation
nTPM: 77.9
Samples: 4

Max nTPM: 83.9
Min nTPM: 68.1
Sample A Male 83.9
Sample B Male 79.9
Sample C Female 79.8
Sample D Female 68.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69114198 Antisense, RP_050317_01_C06, Mouse strain C57BL/6J (56 days, male) 3.4
69838747 Antisense, RP_050321_03_H07, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

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