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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:264.8 nTPM
FANTOM5:440.9 Scaled Tags Per Million
Pig:60.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027541
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 264.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 264.8
Samples: 246

Max nTPM: 7636.8
Min nTPM: 24.7
Std nTPM: 517.1
Median nTPM: 173.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7636.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1363.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1315.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1183.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1127.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 985.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 930.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 922.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 908.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 882.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 835.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 799.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 760.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 695.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 620.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 606.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 602.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 587.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 582.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 554.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 498.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 471.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 448.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 440.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 435.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 414.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 409.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 404.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 389.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 384.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 383.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 376.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 376.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 375.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 372.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 365.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 355.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 343.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 342.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 341.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 338.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 337.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 328.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 326.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 321.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 321.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 318.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 317.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 317.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 317.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 306.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 303.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 300.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 283.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 280.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 278.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 277.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 270.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 264.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 263.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 261.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 259.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 258.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 250.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 250.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 249.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 249.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 249.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 248.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 248.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 247.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 242.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 237.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 234.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 231.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 230.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 230.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 230.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 229.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 229.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 227.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 227.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 225.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 221.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 219.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 217.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 216.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 215.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 212.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 212.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 211.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 210.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 210.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 210.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 209.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 209.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 206.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 206.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 206.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 205.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 205.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 204.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 204.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 201.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 200.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 196.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 195.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 194.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 193.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 193.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 193.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 188.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 187.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 187.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 186.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 184.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 180.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 180.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 179.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 175.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 174.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 173.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 173.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 173.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 171.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 171.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 164.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 163.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 162.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 161.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 161.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 159.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 158.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 158.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 156.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 156.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 155.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 154.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 152.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 151.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 151.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 150.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 148.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 148.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 148.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 147.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 145.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 145.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 144.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 144.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 144.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 143.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 143.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 142.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 142.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 140.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 139.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 138.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 137.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 137.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 136.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 135.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 135.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 135.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 133.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 131.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 131.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 130.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 127.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 126.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 125.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 125.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 124.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 124.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 122.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 119.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 118.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 118.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 117.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 117.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 116.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 115.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 114.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 114.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 113.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 112.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 111.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 108.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 108.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 106.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 104.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 104.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 103.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 103.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 101.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 101.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 100.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 99.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 98.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 98.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 97.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 97.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 95.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 95.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 94.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 94.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 92.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 92.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 91.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 90.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 89.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 86.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 85.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 82.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 82.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 81.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 80.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 79.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 79.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 74.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 73.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 67.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 65.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 60.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 59.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 57.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 53.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 51.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 50.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 50.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 38.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 440.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 440.9
FF:10164-103B2 76 years, female 440.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 60.5
Pig sample Sample description nTPM
Caudate
nTPM: 60.5
Samples: 4

Max nTPM: 66.1
Min nTPM: 55.0
Sample A Female 64.9
Sample B Female 56.0
Sample C Male 66.1
Sample D Male 55.0

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