HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:46.4 nTPM
HPA:46.4 nTPM
GTEx:32.8 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:31.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.4
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1898 Male, age 80, left hemisphere 48.4
2529 Female, age 94, left hemisphere 44.1
2621 Female, age 67, right hemisphere 43.3
1855 Male, age 76, left hemisphere 43.2
1911 Female, age 85, right hemisphere 38.0
2148 Female, age 91, left hemisphere 37.1
Dentate gyrus
nTPM: 42.4
2530 Female, age 94, left hemisphere 45.6
2010 Male, age 76, both hemispheres 43.3
2528 Male, age 74, both hemispheres 42.6
2246 Female, age 85, both hemispheres 42.1
1927 Female, age 91, both hemispheres 40.7
2531 Female, age 67, both hemispheres 40.1
Entorhinal gyrus
nTPM: 44.3
2764 Male, age 80, right hemisphere 47.7
2613 Female, age 94, left hemisphere 44.8
1938 Female, age 85, left hemisphere 44.2
2686 Male, age 75, right hemisphere 44.2
1787 Male, age 76, left hemisphere 44.0
2117 Female, age 91, right hemisphere 40.9
Hippocampus, CA1
nTPM: 41.8
2749 Male, age 80, left hemisphere 46.9
1873 Female, age 85, both hemispheres 42.7
2527 Male, age 74, both hemispheres 41.9
2082 Female, age 91, right hemisphere 39.6
2045 Male, age 76, both hemispheres 37.8
Hippocampus, CA2
nTPM: 43.4
1892 Male, age 76, both hemispheres 52.5
2437 Female, age 94, left hemisphere 46.9
2249 Male, age 74, both hemispheres 43.3
1963 Male, age 80, left hemisphere 40.8
2113 Female, age 91, right hemisphere 38.6
1940 Female, age 85, left hemisphere 38.3
Hippocampus, CA3
nTPM: 44.3
1867 Male, age 76, both hemispheres 50.7
2620 Female, age 94, left hemisphere 45.0
2137 Male, age 80, left hemisphere 43.5
2861 Female, age 67, both hemispheres 43.4
2436 Male, age 74, both hemispheres 42.5
1891 Female, age 85, both hemispheres 40.7
Parahippocampal cortex
nTPM: 45.8
1850 Male, age 80, both hemispheres 53.1
2532 Female, age 72, left hemisphere 48.6
1933 Female, age 85, both hemispheres 47.3
2622 Female, age 67, right hemisphere 47.1
1990 Female, age 91, right hemisphere 44.8
2692 Male, age 74, both hemispheres 44.7
2250 Female, age 67, right hemisphere 44.2
2018 Male, age 76, both hemispheres 43.6
2245 Female, age 91, both hemispheres 43.6
2693 Female, age 94, both hemispheres 41.1
Perirhinal gyrus
nTPM: 46.4
1847 Female, age 91, left hemisphere 50.0
1841 Female, age 85, right hemisphere 48.2
1794 Male, age 80, right hemisphere 47.0
2521 Female, age 94, right hemisphere 43.7
2848 Male, age 76, right hemisphere 43.0
Subiculum
nTPM: 42.3
2438 Female, age 94, left hemisphere 49.2
1977 Female, age 85, both hemispheres 43.5
2619 Male, age 74, both hemispheres 42.5
1901 Male, age 80, both hemispheres 40.8
2042 Male, age 76, both hemispheres 39.0
2729 Female, age 91, right hemisphere 38.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.8
Samples: 197

Max nTPM: 65.5
Min nTPM: 15.9
Std nTPM: 9.7
Median nTPM: 31.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 65.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 63.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 61.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 59.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 59.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 56.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 55.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 54.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 53.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.2
FF:10153-102I9 76 years, female 59.1
FF:10169-103B7 60 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.2
Sample A Female 22.0
Sample B Female 19.4
Sample C Male 19.6
Sample D Male 15.2
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 26.8
Min nTPM: 18.2
Sample A Female 20.4
Sample B Female 26.8
Sample C Male 18.2
Sample D Male 19.8
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.7
Sample A Female 20.5
Sample B Female 18.5
Sample C Male 15.7
Sample D Male 16.3
Ventral hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 18.9
Min nTPM: 16.8
Sample A Female 18.9
Sample B Female 16.8
Sample C Male 17.2
Sample D Male 17.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 24.7
Sample A Male 30.0
Sample B Male 24.8
Sample C Female 29.5
Sample D Female 24.7
Hippocampal formation
nTPM: 31.9
Samples: 4

Max nTPM: 37.3
Min nTPM: 28.4
Sample A Male 37.3
Sample B Male 29.1
Sample C Female 28.4
Sample D Female 32.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68523324 Antisense, RP_050118_02_E08, Mouse strain C57BL/6J (56 days, male) 0.2
71015806 Antisense, RP_050725_02_H04, Mouse strain C57BL/6J (56 days, male) 0.1

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