HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.8 nTPM
HPA:24.8 nTPM
GTEx:22.4 nTPM
FANTOM5:62.7 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:26.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042890Antibody HPA050453
Glial cells LowHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.8
1898 Male, age 80, left hemisphere 25.9
2529 Female, age 94, left hemisphere 25.9
1855 Male, age 76, left hemisphere 25.5
2148 Female, age 91, left hemisphere 25.2
1911 Female, age 85, right hemisphere 25.1
2621 Female, age 67, right hemisphere 21.3
Dentate gyrus
nTPM: 21.7
2528 Male, age 74, both hemispheres 25.6
2246 Female, age 85, both hemispheres 23.8
2010 Male, age 76, both hemispheres 22.8
1927 Female, age 91, both hemispheres 20.7
2530 Female, age 94, left hemisphere 19.6
2531 Female, age 67, both hemispheres 17.8
Entorhinal gyrus
nTPM: 21.5
2117 Female, age 91, right hemisphere 28.4
1938 Female, age 85, left hemisphere 23.9
1787 Male, age 76, left hemisphere 21.5
2686 Male, age 75, right hemisphere 19.2
2764 Male, age 80, right hemisphere 18.9
2613 Female, age 94, left hemisphere 17.3
Hippocampus, CA1
nTPM: 23.7
2527 Male, age 74, both hemispheres 28.1
1873 Female, age 85, both hemispheres 25.3
2082 Female, age 91, right hemisphere 24.9
2045 Male, age 76, both hemispheres 22.3
2749 Male, age 80, left hemisphere 18.0
Hippocampus, CA2
nTPM: 22.3
2249 Male, age 74, both hemispheres 26.2
2113 Female, age 91, right hemisphere 25.6
1940 Female, age 85, left hemisphere 23.2
1892 Male, age 76, both hemispheres 20.2
2437 Female, age 94, left hemisphere 19.6
1963 Male, age 80, left hemisphere 19.1
Hippocampus, CA3
nTPM: 21.6
1891 Female, age 85, both hemispheres 25.6
2436 Male, age 74, both hemispheres 25.3
1867 Male, age 76, both hemispheres 21.0
2620 Female, age 94, left hemisphere 19.9
2861 Female, age 67, both hemispheres 19.0
2137 Male, age 80, left hemisphere 18.8
Parahippocampal cortex
nTPM: 23.0
2250 Female, age 67, right hemisphere 26.1
2692 Male, age 74, both hemispheres 25.5
1933 Female, age 85, both hemispheres 24.0
2018 Male, age 76, both hemispheres 23.3
1850 Male, age 80, both hemispheres 23.1
1990 Female, age 91, right hemisphere 22.4
2622 Female, age 67, right hemisphere 22.4
2245 Female, age 91, both hemispheres 22.1
2693 Female, age 94, both hemispheres 21.9
2532 Female, age 72, left hemisphere 19.0
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 23.4
1841 Female, age 85, right hemisphere 23.2
1794 Male, age 80, right hemisphere 22.7
2521 Female, age 94, right hemisphere 21.5
2848 Male, age 76, right hemisphere 20.1
Subiculum
nTPM: 24.1
2729 Female, age 91, right hemisphere 29.7
2619 Male, age 74, both hemispheres 26.2
2042 Male, age 76, both hemispheres 23.6
2438 Female, age 94, left hemisphere 22.4
1977 Female, age 85, both hemispheres 21.6
1901 Male, age 80, both hemispheres 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 53.8
Min nTPM: 5.9
Std nTPM: 8.1
Median nTPM: 21.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 53.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 48.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 47.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 45.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 44.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 41.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 40.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 40.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 38.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 38.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.7
FF:10153-102I9 76 years, female 81.5
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 24.2
Min nTPM: 11.1
Sample A Female 24.2
Sample B Female 17.4
Sample C Male 24.0
Sample D Male 11.1
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 17.9
Min nTPM: 10.4
Sample A Female 14.0
Sample B Female 17.8
Sample C Male 17.9
Sample D Male 10.4
Subiculum
nTPM: 18.5
Samples: 4

Max nTPM: 22.1
Min nTPM: 14.4
Sample A Female 22.1
Sample B Female 20.6
Sample C Male 16.9
Sample D Male 14.4
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.0
Sample A Female 20.3
Sample B Female 18.3
Sample C Male 17.2
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.4
Samples: 4

Max nTPM: 28.2
Min nTPM: 24.7
Sample A Male 26.6
Sample B Male 26.1
Sample C Female 28.2
Sample D Female 24.7
Hippocampal formation
nTPM: 25.5
Samples: 4

Max nTPM: 28.7
Min nTPM: 23.2
Sample A Male 28.7
Sample B Male 24.1
Sample C Female 23.2
Sample D Female 26.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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