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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:151.1 nTPM
HPA:151.1 nTPM
GTEx:272.7 nTPM
FANTOM5:248.5 Scaled Tags Per Million
Pig:106.8 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 151.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 148.3
1981 Female, age 72, midline 181.3
2048 Male, age 55, midline 151.3
2816 Male, age 47, midline 144.5
2565 Male, age 75, midline 134.5
2194 Female, age 79, both hemispheres 130.0
Cervical spinal cord, dorsal horn
nTPM: 151.1
2173 Female, age 72, unknown 185.0
2296 Male, age 66, both hemispheres 173.3
2069 Male, age 47, both hemispheres 153.5
2721 Male, age 90, both hemispheres 138.7
1877 Male, age 55, unknown 137.2
2297 Male, age 75, both hemispheres 118.7
Cervical spinal cord, ventral horn
nTPM: 149.4
2098 Female, age 72, unknown 216.5
2809 Male, age 90, both hemispheres 151.5
2295 Male, age 66, both hemispheres 139.1
2480 Male, age 75, both hemispheres 133.4
2820 Female, age 79, both hemispheres 130.3
2068 Male, age 55, unknown 125.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 272.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 272.7
Samples: 159

Max nTPM: 891.2
Min nTPM: 105.9
Std nTPM: 93.0
Median nTPM: 262.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 891.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 732.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 450.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 438.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 414.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 413.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 402.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 398.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 395.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 391.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 388.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 386.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 382.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 381.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 376.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 375.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 372.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 371.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 360.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 360.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 358.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 357.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 352.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 348.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 347.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 347.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 346.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 341.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 339.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 338.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 336.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 334.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 334.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 333.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 333.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 327.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 322.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 313.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 310.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 309.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 306.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 306.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 304.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 304.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 302.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 297.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 295.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 294.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 293.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 292.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 291.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 290.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 290.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 289.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 285.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 285.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 285.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 284.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 283.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 280.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 277.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 275.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 275.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 274.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 273.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 273.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 270.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 270.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 269.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 269.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 268.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 267.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 266.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 265.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 264.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 264.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 263.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 262.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 262.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 262.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 261.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 260.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 260.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 259.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 259.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 259.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 259.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 258.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 257.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 256.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 255.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 255.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 254.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 254.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 253.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 253.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 252.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 251.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 249.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 248.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 243.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 242.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 238.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 237.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 234.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 234.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 233.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 233.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 231.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 229.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 223.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 220.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 219.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 219.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 218.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 217.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 217.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 216.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 215.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 215.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 213.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 212.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 212.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 210.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 210.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 210.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 209.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 208.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 207.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 207.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 206.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 205.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 205.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 204.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 204.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 203.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 192.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 187.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 187.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 186.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 186.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 183.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 183.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 181.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 180.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 178.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 176.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 161.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 160.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 158.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 156.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 153.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 145.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 139.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 130.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 125.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 121.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 121.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 105.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 248.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 248.5
FF:10159-103A6 76 years, female 262.4
FF:10181-103D1 60 years, female 234.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 106.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 103.4
Samples: 4

Max nTPM: 140.0
Min nTPM: 78.7
Sample A Female 78.7
Sample B Female 114.7
Sample C Male 140.0
Sample D Male 80.1
Ventral spinal cord
nTPM: 106.8
Samples: 4

Max nTPM: 112.9
Min nTPM: 102.2
Sample A Female 102.2
Sample B Female 112.9
Sample C Male 108.5
Sample D Male 103.5

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