HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1047.9 nTPM
HPA:1047.9 nTPM
GTEx:1266.5 nTPM
FANTOM5:19.4 Scaled Tags Per Million
Pig:36.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047252
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1047.9
Sample id Sample description nTPM
Hippocampus
nTPM: 1046.7
2529 Female, age 94, left hemisphere 1077.9
2621 Female, age 67, right hemisphere 1059.6
2148 Female, age 91, left hemisphere 1040.5
1898 Male, age 80, left hemisphere 1040.3
1911 Female, age 85, right hemisphere 1035.5
1855 Male, age 76, left hemisphere 1026.6
Dentate gyrus
nTPM: 1047.9
2530 Female, age 94, left hemisphere 1089.8
2246 Female, age 85, both hemispheres 1061.3
2010 Male, age 76, both hemispheres 1044.2
2531 Female, age 67, both hemispheres 1043.7
2528 Male, age 74, both hemispheres 1034.1
1927 Female, age 91, both hemispheres 1014.2
Entorhinal gyrus
nTPM: 1046.8
2686 Male, age 75, right hemisphere 1079.7
2117 Female, age 91, right hemisphere 1054.2
2764 Male, age 80, right hemisphere 1043.5
1787 Male, age 76, left hemisphere 1042.7
1938 Female, age 85, left hemisphere 1030.9
2613 Female, age 94, left hemisphere 1029.8
Hippocampus, CA1
nTPM: 1041.4
2527 Male, age 74, both hemispheres 1053.2
2749 Male, age 80, left hemisphere 1051.7
2045 Male, age 76, both hemispheres 1045.2
2082 Female, age 91, right hemisphere 1034.7
1873 Female, age 85, both hemispheres 1022.0
Hippocampus, CA2
nTPM: 1038.8
1963 Male, age 80, left hemisphere 1053.4
2113 Female, age 91, right hemisphere 1045.3
2437 Female, age 94, left hemisphere 1041.5
2249 Male, age 74, both hemispheres 1040.8
1892 Male, age 76, both hemispheres 1037.5
1940 Female, age 85, left hemisphere 1014.3
Hippocampus, CA3
nTPM: 1034.1
2137 Male, age 80, left hemisphere 1050.4
1891 Female, age 85, both hemispheres 1042.9
2861 Female, age 67, both hemispheres 1042.6
1867 Male, age 76, both hemispheres 1026.4
2436 Male, age 74, both hemispheres 1021.9
2620 Female, age 94, left hemisphere 1020.5
Parahippocampal cortex
nTPM: 1040.0
2245 Female, age 91, both hemispheres 1058.2
2018 Male, age 76, both hemispheres 1051.6
2692 Male, age 74, both hemispheres 1051.6
1990 Female, age 91, right hemisphere 1047.6
2532 Female, age 72, left hemisphere 1046.2
2250 Female, age 67, right hemisphere 1042.8
2622 Female, age 67, right hemisphere 1030.4
1850 Male, age 80, both hemispheres 1025.1
1933 Female, age 85, both hemispheres 1024.2
2693 Female, age 94, both hemispheres 1022.1
Perirhinal gyrus
nTPM: 1030.1
2848 Male, age 76, right hemisphere 1050.9
1794 Male, age 80, right hemisphere 1031.9
2521 Female, age 94, right hemisphere 1030.2
1841 Female, age 85, right hemisphere 1024.4
1847 Female, age 91, left hemisphere 1013.1
Subiculum
nTPM: 1047.2
1977 Female, age 85, both hemispheres 1063.6
2438 Female, age 94, left hemisphere 1057.0
2042 Male, age 76, both hemispheres 1052.9
2729 Female, age 91, right hemisphere 1037.8
2619 Male, age 74, both hemispheres 1036.9
1901 Male, age 80, both hemispheres 1035.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1266.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1266.5
Samples: 197

Max nTPM: 3509.6
Min nTPM: 525.4
Std nTPM: 516.1
Median nTPM: 1138.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3509.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3110.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2813.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2790.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2574.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2540.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2514.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2468.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 2436.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2409.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 2361.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.4
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 13.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 43.3
Min nTPM: 28.8
Sample A Female 43.3
Sample B Female 33.2
Sample C Male 38.7
Sample D Male 28.8
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 37.9
Min nTPM: 23.6
Sample A Female 28.1
Sample B Female 37.9
Sample C Male 31.0
Sample D Male 23.6
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 38.3
Min nTPM: 25.8
Sample A Female 38.3
Sample B Female 28.7
Sample C Male 26.6
Sample D Male 25.8
Ventral hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 34.0
Min nTPM: 29.6
Sample A Female 31.4
Sample B Female 29.6
Sample C Male 32.8
Sample D Male 34.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.