HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:92.7 nTPM
HPA:92.7 nTPM
GTEx:81.1 nTPM
FANTOM5:444.2 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:682.0 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.7
Sample id Sample description nTPM
Hippocampus
nTPM: 91.8
1898 Male, age 80, left hemisphere 94.2
1855 Male, age 76, left hemisphere 92.4
2529 Female, age 94, left hemisphere 92.2
1911 Female, age 85, right hemisphere 91.4
2148 Female, age 91, left hemisphere 90.5
2621 Female, age 67, right hemisphere 90.3
Dentate gyrus
nTPM: 90.7
2010 Male, age 76, both hemispheres 93.6
2530 Female, age 94, left hemisphere 91.7
2246 Female, age 85, both hemispheres 91.2
2528 Male, age 74, both hemispheres 90.4
1927 Female, age 91, both hemispheres 89.5
2531 Female, age 67, both hemispheres 88.1
Entorhinal gyrus
nTPM: 89.5
2117 Female, age 91, right hemisphere 90.7
1938 Female, age 85, left hemisphere 90.4
1787 Male, age 76, left hemisphere 89.9
2764 Male, age 80, right hemisphere 89.6
2686 Male, age 75, right hemisphere 88.6
2613 Female, age 94, left hemisphere 88.1
Hippocampus, CA1
nTPM: 92.7
2749 Male, age 80, left hemisphere 96.4
2045 Male, age 76, both hemispheres 92.9
1873 Female, age 85, both hemispheres 92.7
2527 Male, age 74, both hemispheres 91.5
2082 Female, age 91, right hemisphere 90.0
Hippocampus, CA2
nTPM: 91.8
1963 Male, age 80, left hemisphere 93.8
1892 Male, age 76, both hemispheres 93.5
2249 Male, age 74, both hemispheres 91.9
2437 Female, age 94, left hemisphere 91.3
1940 Female, age 85, left hemisphere 90.7
2113 Female, age 91, right hemisphere 89.5
Hippocampus, CA3
nTPM: 91.4
1867 Male, age 76, both hemispheres 93.4
2436 Male, age 74, both hemispheres 93.2
2137 Male, age 80, left hemisphere 92.6
1891 Female, age 85, both hemispheres 91.7
2620 Female, age 94, left hemisphere 89.6
2861 Female, age 67, both hemispheres 87.9
Parahippocampal cortex
nTPM: 90.2
2018 Male, age 76, both hemispheres 92.3
2250 Female, age 67, right hemisphere 90.9
2245 Female, age 91, both hemispheres 90.8
1850 Male, age 80, both hemispheres 90.7
2532 Female, age 72, left hemisphere 90.7
1933 Female, age 85, both hemispheres 90.2
1990 Female, age 91, right hemisphere 89.8
2692 Male, age 74, both hemispheres 89.8
2693 Female, age 94, both hemispheres 88.4
2622 Female, age 67, right hemisphere 88.1
Perirhinal gyrus
nTPM: 91.2
1847 Female, age 91, left hemisphere 93.8
1841 Female, age 85, right hemisphere 91.7
1794 Male, age 80, right hemisphere 91.0
2521 Female, age 94, right hemisphere 90.5
2848 Male, age 76, right hemisphere 89.0
Subiculum
nTPM: 91.1
2042 Male, age 76, both hemispheres 92.4
1901 Male, age 80, both hemispheres 91.8
1977 Female, age 85, both hemispheres 91.8
2438 Female, age 94, left hemisphere 91.0
2619 Male, age 74, both hemispheres 89.9
2729 Female, age 91, right hemisphere 89.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.1
Samples: 197

Max nTPM: 227.4
Min nTPM: 31.8
Std nTPM: 28.8
Median nTPM: 74.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 162.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 158.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 154.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 152.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 149.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 147.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 146.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 136.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 132.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 132.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 444.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 444.2
FF:10169-103B7 60 years, female 616.3
FF:10153-102I9 76 years, female 272.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 29.2
Min nTPM: 14.2
Sample A Female 29.2
Sample B Female 17.0
Sample C Male 20.7
Sample D Male 14.2
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 12.6
Sample A Female 16.9
Sample B Female 21.5
Sample C Male 18.8
Sample D Male 12.6
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 24.2
Min nTPM: 12.3
Sample A Female 24.2
Sample B Female 15.4
Sample C Male 12.3
Sample D Male 12.9
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.5
Min nTPM: 14.4
Sample A Female 20.5
Sample B Female 14.4
Sample C Male 16.5
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 682.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 638.5
Samples: 4

Max nTPM: 697.4
Min nTPM: 574.8
Sample A Male 599.3
Sample B Male 682.4
Sample C Female 697.4
Sample D Female 574.8
Hippocampal formation
nTPM: 682.0
Samples: 4

Max nTPM: 795.0
Min nTPM: 599.9
Sample A Male 795.0
Sample B Male 599.9
Sample C Female 644.4
Sample D Female 688.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
69173370 Antisense, RP_050329_01_E03, Mouse strain C57BL/6J (56 days, male) 4.2

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