HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.1 nTPM
HPA:39.1 nTPM
GTEx:48.1 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Mouse:44.7 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041019Antibody HPA042033
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.1
Sample id Sample description nTPM
Hippocampus
nTPM: 38.0
2621 Female, age 67, right hemisphere 41.6
2148 Female, age 91, left hemisphere 39.4
2529 Female, age 94, left hemisphere 39.3
1855 Male, age 76, left hemisphere 36.9
1911 Female, age 85, right hemisphere 36.5
1898 Male, age 80, left hemisphere 34.6
Dentate gyrus
nTPM: 39.1
2531 Female, age 67, both hemispheres 51.3
2530 Female, age 94, left hemisphere 39.1
2246 Female, age 85, both hemispheres 37.4
2010 Male, age 76, both hemispheres 36.1
2528 Male, age 74, both hemispheres 35.8
1927 Female, age 91, both hemispheres 34.8
Entorhinal gyrus
nTPM: 37.3
2686 Male, age 75, right hemisphere 44.3
2613 Female, age 94, left hemisphere 39.8
2764 Male, age 80, right hemisphere 37.1
2117 Female, age 91, right hemisphere 35.7
1787 Male, age 76, left hemisphere 35.2
1938 Female, age 85, left hemisphere 31.8
Hippocampus, CA1
nTPM: 36.9
2045 Male, age 76, both hemispheres 39.7
2082 Female, age 91, right hemisphere 38.1
1873 Female, age 85, both hemispheres 37.9
2527 Male, age 74, both hemispheres 37.9
2749 Male, age 80, left hemisphere 31.0
Hippocampus, CA2
nTPM: 35.9
1940 Female, age 85, left hemisphere 39.9
2113 Female, age 91, right hemisphere 37.1
1963 Male, age 80, left hemisphere 36.1
2437 Female, age 94, left hemisphere 35.7
1892 Male, age 76, both hemispheres 34.0
2249 Male, age 74, both hemispheres 32.7
Hippocampus, CA3
nTPM: 38.1
2861 Female, age 67, both hemispheres 50.0
2620 Female, age 94, left hemisphere 43.6
1891 Female, age 85, both hemispheres 38.2
1867 Male, age 76, both hemispheres 33.3
2436 Male, age 74, both hemispheres 32.0
2137 Male, age 80, left hemisphere 31.6
Parahippocampal cortex
nTPM: 37.3
2622 Female, age 67, right hemisphere 45.9
2692 Male, age 74, both hemispheres 43.2
2532 Female, age 72, left hemisphere 36.8
2693 Female, age 94, both hemispheres 36.5
1850 Male, age 80, both hemispheres 35.9
1933 Female, age 85, both hemispheres 35.7
2245 Female, age 91, both hemispheres 35.5
2018 Male, age 76, both hemispheres 34.7
1990 Female, age 91, right hemisphere 34.6
2250 Female, age 67, right hemisphere 33.6
Perirhinal gyrus
nTPM: 35.4
2521 Female, age 94, right hemisphere 37.3
2848 Male, age 76, right hemisphere 36.5
1841 Female, age 85, right hemisphere 35.2
1794 Male, age 80, right hemisphere 34.6
1847 Female, age 91, left hemisphere 33.2
Subiculum
nTPM: 37.1
2729 Female, age 91, right hemisphere 38.9
2619 Male, age 74, both hemispheres 38.5
2042 Male, age 76, both hemispheres 37.3
1901 Male, age 80, both hemispheres 37.0
2438 Female, age 94, left hemisphere 35.9
1977 Female, age 85, both hemispheres 34.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.1
Samples: 197

Max nTPM: 104.2
Min nTPM: 16.9
Std nTPM: 13.4
Median nTPM: 45.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 104.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 95.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 94.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 88.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 85.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 81.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 78.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 74.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 74.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 73.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 73.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.4
FF:10153-102I9 76 years, female 86.8
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 57.2
Min nTPM: 34.3
Sample A Male 45.0
Sample B Male 57.2
Sample C Female 42.5
Sample D Female 34.3
Hippocampal formation
nTPM: 42.4
Samples: 4

Max nTPM: 51.0
Min nTPM: 35.3
Sample A Male 35.3
Sample B Male 51.0
Sample C Female 44.6
Sample D Female 38.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
70302288 Antisense, RP_050607_04_B01, Mouse strain C57BL/6J (56 days, male) 3.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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