HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.2 nTPM
HPA:47.2 nTPM
GTEx:34.2 nTPM
FANTOM5:144.1 Scaled Tags Per Million
Pig:6.4 nTPM
Mouse:10.9 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB000064Antibody CAB069401
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.2
Sample id Sample description nTPM
Hippocampus
nTPM: 42.7
1855 Male, age 76, left hemisphere 44.7
2529 Female, age 94, left hemisphere 44.5
1898 Male, age 80, left hemisphere 43.2
2621 Female, age 67, right hemisphere 42.6
2148 Female, age 91, left hemisphere 40.8
1911 Female, age 85, right hemisphere 40.4
Dentate gyrus
nTPM: 42.5
2531 Female, age 67, both hemispheres 44.8
2010 Male, age 76, both hemispheres 43.8
2530 Female, age 94, left hemisphere 43.3
2528 Male, age 74, both hemispheres 42.6
2246 Female, age 85, both hemispheres 41.3
1927 Female, age 91, both hemispheres 39.1
Entorhinal gyrus
nTPM: 42.6
1787 Male, age 76, left hemisphere 45.5
2686 Male, age 75, right hemisphere 44.7
2117 Female, age 91, right hemisphere 44.6
2764 Male, age 80, right hemisphere 42.2
1938 Female, age 85, left hemisphere 39.3
2613 Female, age 94, left hemisphere 39.1
Hippocampus, CA1
nTPM: 41.4
2045 Male, age 76, both hemispheres 44.0
2082 Female, age 91, right hemisphere 43.8
2527 Male, age 74, both hemispheres 41.3
1873 Female, age 85, both hemispheres 39.4
2749 Male, age 80, left hemisphere 38.6
Hippocampus, CA2
nTPM: 43.1
2249 Male, age 74, both hemispheres 48.5
1940 Female, age 85, left hemisphere 44.7
2437 Female, age 94, left hemisphere 43.0
2113 Female, age 91, right hemisphere 42.2
1963 Male, age 80, left hemisphere 40.9
1892 Male, age 76, both hemispheres 39.6
Hippocampus, CA3
nTPM: 47.2
2436 Male, age 74, both hemispheres 73.4
2861 Female, age 67, both hemispheres 44.3
2137 Male, age 80, left hemisphere 42.6
1867 Male, age 76, both hemispheres 42.1
2620 Female, age 94, left hemisphere 40.6
1891 Female, age 85, both hemispheres 40.5
Parahippocampal cortex
nTPM: 41.9
2018 Male, age 76, both hemispheres 44.8
2250 Female, age 67, right hemisphere 43.5
2622 Female, age 67, right hemisphere 43.0
2532 Female, age 72, left hemisphere 42.5
2692 Male, age 74, both hemispheres 41.5
1933 Female, age 85, both hemispheres 41.4
1990 Female, age 91, right hemisphere 40.9
1850 Male, age 80, both hemispheres 40.8
2245 Female, age 91, both hemispheres 40.7
2693 Female, age 94, both hemispheres 39.4
Perirhinal gyrus
nTPM: 40.9
2848 Male, age 76, right hemisphere 43.0
1841 Female, age 85, right hemisphere 41.3
1847 Female, age 91, left hemisphere 40.3
1794 Male, age 80, right hemisphere 40.2
2521 Female, age 94, right hemisphere 39.7
Subiculum
nTPM: 42.8
2042 Male, age 76, both hemispheres 44.7
1901 Male, age 80, both hemispheres 43.4
2619 Male, age 74, both hemispheres 42.3
1977 Female, age 85, both hemispheres 42.2
2729 Female, age 91, right hemisphere 42.2
2438 Female, age 94, left hemisphere 42.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.2
Samples: 197

Max nTPM: 291.8
Min nTPM: 1.7
Std nTPM: 41.9
Median nTPM: 18.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 291.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 213.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 211.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 200.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 173.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 168.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 150.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 144.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 115.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 110.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 103.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.1
FF:10169-103B7 60 years, female 228.1
FF:10153-102I9 76 years, female 60.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 2.2
Sample A Female 8.6
Sample B Female 5.6
Sample C Male 9.1
Sample D Male 2.2
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.8
Sample A Female 6.1
Sample B Female 4.8
Sample C Male 3.8
Sample D Male 5.4
Subiculum
nTPM: 4.6
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.6
Sample A Female 4.6
Sample B Female 3.6
Sample C Male 3.9
Sample D Male 6.3
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 9.0
Min nTPM: 3.2
Sample A Female 5.9
Sample B Female 3.2
Sample C Male 9.0
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.7
Sample A Male 8.7
Sample B Male 12.4
Sample C Female 10.5
Sample D Female 12.1
Hippocampal formation
nTPM: 6.9
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.2
Sample A Male 5.2
Sample B Male 6.6
Sample C Female 7.9
Sample D Female 8.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
2086 Antisense, RP_Baylor_253890, Mouse strain C57BL/6J (56 days, male) 1.4
80343383 Antisense, RP_071204_04_G04, Mouse strain C57BL/6J (56 days, male) 0.5
2085 Antisense, RP_Baylor_253890, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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