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CDKN1A
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:55.0 nTPM
HPA:55.0 nTPM
GTEx:50.0 nTPM
FANTOM5:254.1 Scaled Tags Per Million
Pig:19.2 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 55.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 45.7
1981 Female, age 72, midline 48.6
2194 Female, age 79, both hemispheres 46.0
2048 Male, age 55, midline 45.7
2565 Male, age 75, midline 45.1
2816 Male, age 47, midline 43.4
Cervical spinal cord, dorsal horn
nTPM: 49.6
2069 Male, age 47, both hemispheres 53.2
1877 Male, age 55, unknown 51.6
2173 Female, age 72, unknown 51.1
2721 Male, age 90, both hemispheres 51.1
2296 Male, age 66, both hemispheres 46.4
2297 Male, age 75, both hemispheres 44.3
Cervical spinal cord, ventral horn
nTPM: 55.0
2809 Male, age 90, both hemispheres 68.1
2098 Female, age 72, unknown 64.0
2295 Male, age 66, both hemispheres 55.2
2480 Male, age 75, both hemispheres 54.5
2820 Female, age 79, both hemispheres 45.7
2068 Male, age 55, unknown 42.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 50.0
Samples: 159

Max nTPM: 421.8
Min nTPM: 3.5
Std nTPM: 57.1
Median nTPM: 33.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 421.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 336.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 258.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 247.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 184.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 184.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 179.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 175.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 162.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 118.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 115.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 114.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 113.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 113.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 111.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 103.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 103.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 102.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 101.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 98.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 95.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 81.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 79.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 76.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 74.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 73.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 71.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 67.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 67.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 66.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 66.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 66.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 65.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 65.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 65.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 63.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 62.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 62.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 62.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 61.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 60.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 59.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 55.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 53.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 53.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 52.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 52.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 52.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 51.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 50.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 49.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 49.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 49.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 47.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 45.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 45.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 45.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 43.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 43.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 42.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 42.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 41.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 41.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 41.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 41.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 41.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 40.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 39.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 39.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 38.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 38.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 36.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 36.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 36.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 36.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 35.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 35.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 35.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 34.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 33.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 31.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 31.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 30.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 30.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 29.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 29.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 28.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 28.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 27.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 27.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 27.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 27.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 26.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 26.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 26.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 26.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 25.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 24.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 23.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 23.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 23.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 22.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 22.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 22.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 22.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 22.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 21.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 21.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 21.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 21.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 21.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 21.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 21.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 20.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 20.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 19.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 19.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 19.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 19.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 18.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 17.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 17.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 17.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 16.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 16.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 15.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 15.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 15.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 15.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 15.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 15.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 14.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 13.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 13.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 13.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 13.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 13.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 12.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 11.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 11.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 11.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 11.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 11.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 11.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 10.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 10.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 10.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 10.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 10.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 10.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 9.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 8.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 7.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 7.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 6.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 6.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 5.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 4.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 3.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 254.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 254.1
FF:10181-103D1 60 years, female 267.0
FF:10159-103A6 76 years, female 241.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 19.1
Samples: 4

Max nTPM: 37.4
Min nTPM: 7.2
Sample A Female 7.2
Sample B Female 17.3
Sample C Male 37.4
Sample D Male 14.6
Ventral spinal cord
nTPM: 19.3
Samples: 4

Max nTPM: 27.0
Min nTPM: 14.6
Sample A Female 14.6
Sample B Female 19.3
Sample C Male 27.0
Sample D Male 16.1

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