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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:72.6 nTPM
FANTOM5:139.7 Scaled Tags Per Million
Pig:21.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB040541Antibody CAB040542
Glial cells MediumLow
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 72.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 72.6
Samples: 246

Max nTPM: 140.8
Min nTPM: 48.3
Std nTPM: 14.6
Median nTPM: 69.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 140.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 128.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 128.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 128.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 124.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 121.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 120.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 114.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 109.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 101.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 99.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 99.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 98.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 95.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 94.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 93.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 91.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 90.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 90.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 90.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 89.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 88.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 88.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 88.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 88.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 88.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 88.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 87.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 87.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 87.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 87.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 86.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 86.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 85.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 83.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 83.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 83.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 83.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 82.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 82.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 81.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 81.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 81.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 80.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 80.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 80.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 80.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 79.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 79.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 79.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 79.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 78.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 78.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 78.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 78.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 78.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 78.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 78.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 77.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 77.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 77.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 76.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 76.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 76.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 76.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 76.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 75.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 75.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 75.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 75.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 75.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 75.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 74.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 74.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 74.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 74.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 74.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 74.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 73.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 73.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 73.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 73.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 73.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 73.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 72.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 72.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 72.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 71.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 71.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 71.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 71.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 71.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 71.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 70.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 70.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 70.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 70.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 70.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 70.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 70.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 70.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 70.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 69.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 69.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 69.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 69.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 69.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 69.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 68.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 68.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 68.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 68.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 68.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 68.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 67.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 67.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 67.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 67.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 67.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 67.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 67.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 67.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 66.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 66.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 66.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 66.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 66.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 66.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 66.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 66.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 66.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 65.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 65.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 65.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 65.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 65.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 65.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 65.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 65.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 65.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 65.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 64.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 64.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 64.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 64.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 64.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 64.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 64.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 64.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 63.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 63.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 63.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 63.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 63.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 62.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 62.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 62.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 61.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 61.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 61.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 61.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 60.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 60.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 60.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 59.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 59.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 58.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 58.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 58.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 58.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 58.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 58.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 57.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 57.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 57.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 57.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 56.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 53.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 53.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 52.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 52.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 52.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 49.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 48.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 139.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 139.7
FF:10164-103B2 76 years, female 139.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 21.6
Pig sample Sample description nTPM
Caudate
nTPM: 21.6
Samples: 4

Max nTPM: 23.4
Min nTPM: 20.2
Sample A Female 21.8
Sample B Female 20.9
Sample C Male 23.4
Sample D Male 20.2

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