HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.6 nTPM
HPA:8.6 nTPM
GTEx:9.8 nTPM
FANTOM5:71.9 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:24.2 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046577Antibody HPA049664
Glial cells Not detectedNot detected
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.6
Sample id Sample description nTPM
Hippocampus
nTPM: 7.6
2621 Female, age 67, right hemisphere 9.7
2529 Female, age 94, left hemisphere 9.1
1911 Female, age 85, right hemisphere 8.5
2148 Female, age 91, left hemisphere 7.2
1855 Male, age 76, left hemisphere 6.8
1898 Male, age 80, left hemisphere 4.3
Dentate gyrus
nTPM: 6.7
1927 Female, age 91, both hemispheres 7.8
2010 Male, age 76, both hemispheres 6.9
2530 Female, age 94, left hemisphere 6.9
2246 Female, age 85, both hemispheres 6.4
2528 Male, age 74, both hemispheres 6.3
2531 Female, age 67, both hemispheres 5.9
Entorhinal gyrus
nTPM: 6.2
2686 Male, age 75, right hemisphere 7.0
1938 Female, age 85, left hemisphere 6.9
1787 Male, age 76, left hemisphere 6.3
2117 Female, age 91, right hemisphere 6.2
2764 Male, age 80, right hemisphere 6.1
2613 Female, age 94, left hemisphere 4.9
Hippocampus, CA1
nTPM: 6.8
2527 Male, age 74, both hemispheres 7.6
1873 Female, age 85, both hemispheres 7.3
2082 Female, age 91, right hemisphere 7.2
2749 Male, age 80, left hemisphere 6.3
2045 Male, age 76, both hemispheres 5.6
Hippocampus, CA2
nTPM: 5.9
1940 Female, age 85, left hemisphere 8.1
1963 Male, age 80, left hemisphere 6.8
2249 Male, age 74, both hemispheres 6.3
1892 Male, age 76, both hemispheres 5.1
2437 Female, age 94, left hemisphere 5.0
2113 Female, age 91, right hemisphere 4.2
Hippocampus, CA3
nTPM: 7.2
2436 Male, age 74, both hemispheres 10.6
1891 Female, age 85, both hemispheres 9.1
2137 Male, age 80, left hemisphere 6.9
1867 Male, age 76, both hemispheres 6.3
2620 Female, age 94, left hemisphere 6.2
2861 Female, age 67, both hemispheres 4.2
Parahippocampal cortex
nTPM: 6.8
1850 Male, age 80, both hemispheres 8.9
2245 Female, age 91, both hemispheres 7.9
2018 Male, age 76, both hemispheres 7.8
2692 Male, age 74, both hemispheres 7.8
2693 Female, age 94, both hemispheres 7.8
1933 Female, age 85, both hemispheres 7.6
2622 Female, age 67, right hemisphere 5.6
2250 Female, age 67, right hemisphere 5.4
2532 Female, age 72, left hemisphere 5.2
1990 Female, age 91, right hemisphere 4.3
Perirhinal gyrus
nTPM: 7.4
1841 Female, age 85, right hemisphere 8.8
1847 Female, age 91, left hemisphere 8.7
1794 Male, age 80, right hemisphere 7.6
2848 Male, age 76, right hemisphere 6.1
2521 Female, age 94, right hemisphere 5.7
Subiculum
nTPM: 8.6
2438 Female, age 94, left hemisphere 14.7
2619 Male, age 74, both hemispheres 9.0
1901 Male, age 80, both hemispheres 8.0
1977 Female, age 85, both hemispheres 7.4
2042 Male, age 76, both hemispheres 6.1
2729 Female, age 91, right hemisphere 6.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 22.6
Min nTPM: 2.3
Std nTPM: 3.4
Median nTPM: 9.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 18.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 17.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 17.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 17.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 15.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 15.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 15.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 15.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.9
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 34.7
Min nTPM: 26.6
Sample A Female 34.7
Sample B Female 30.8
Sample C Male 31.5
Sample D Male 26.6
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 31.3
Min nTPM: 23.1
Sample A Female 31.3
Sample B Female 28.9
Sample C Male 26.4
Sample D Male 23.1
Subiculum
nTPM: 29.4
Samples: 4

Max nTPM: 33.2
Min nTPM: 26.3
Sample A Female 33.2
Sample B Female 30.6
Sample C Male 27.3
Sample D Male 26.3
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 33.5
Min nTPM: 25.8
Sample A Female 30.3
Sample B Female 25.8
Sample C Male 32.4
Sample D Male 33.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 26.4
Min nTPM: 21.5
Sample A Male 22.4
Sample B Male 22.4
Sample C Female 21.5
Sample D Female 26.4
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 28.0
Min nTPM: 20.1
Sample A Male 20.8
Sample B Male 27.9
Sample C Female 28.0
Sample D Female 20.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
68546440 Antisense, RP_050120_02_E04, Mouse strain C57BL/6J (56 days, male) 6.8

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