HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:9.5 nTPM
HPA:9.5 nTPM
GTEx:11.0 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:9.3 nTPM
Mouse:15.0 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043116
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.5
2148 Female, age 91, left hemisphere 12.0
2529 Female, age 94, left hemisphere 10.6
2621 Female, age 67, right hemisphere 10.5
1855 Male, age 76, left hemisphere 8.8
1911 Female, age 85, right hemisphere 8.0
1898 Male, age 80, left hemisphere 7.0
Dentate gyrus
nTPM: 9.2
2531 Female, age 67, both hemispheres 11.8
2246 Female, age 85, both hemispheres 9.5
2530 Female, age 94, left hemisphere 9.3
1927 Female, age 91, both hemispheres 8.7
2528 Male, age 74, both hemispheres 8.1
2010 Male, age 76, both hemispheres 8.0
Entorhinal gyrus
nTPM: 8.5
2613 Female, age 94, left hemisphere 10.0
2686 Male, age 75, right hemisphere 9.9
2764 Male, age 80, right hemisphere 8.8
2117 Female, age 91, right hemisphere 8.2
1938 Female, age 85, left hemisphere 7.2
1787 Male, age 76, left hemisphere 7.0
Hippocampus, CA1
nTPM: 8.7
2045 Male, age 76, both hemispheres 9.3
2082 Female, age 91, right hemisphere 9.2
1873 Female, age 85, both hemispheres 8.6
2527 Male, age 74, both hemispheres 8.3
2749 Male, age 80, left hemisphere 8.0
Hippocampus, CA2
nTPM: 7.7
2437 Female, age 94, left hemisphere 9.0
1963 Male, age 80, left hemisphere 8.6
2113 Female, age 91, right hemisphere 8.6
1940 Female, age 85, left hemisphere 7.4
2249 Male, age 74, both hemispheres 6.4
1892 Male, age 76, both hemispheres 6.2
Hippocampus, CA3
nTPM: 9.5
2620 Female, age 94, left hemisphere 12.0
2861 Female, age 67, both hemispheres 12.0
2137 Male, age 80, left hemisphere 8.8
1891 Female, age 85, both hemispheres 8.4
2436 Male, age 74, both hemispheres 8.4
1867 Male, age 76, both hemispheres 7.0
Parahippocampal cortex
nTPM: 8.6
2622 Female, age 67, right hemisphere 12.1
2692 Male, age 74, both hemispheres 9.3
2532 Female, age 72, left hemisphere 9.2
2018 Male, age 76, both hemispheres 8.7
2245 Female, age 91, both hemispheres 8.7
2693 Female, age 94, both hemispheres 8.5
1990 Female, age 91, right hemisphere 7.5
2250 Female, age 67, right hemisphere 7.5
1850 Male, age 80, both hemispheres 7.2
1933 Female, age 85, both hemispheres 6.8
Perirhinal gyrus
nTPM: 7.2
2521 Female, age 94, right hemisphere 7.9
1794 Male, age 80, right hemisphere 7.6
2848 Male, age 76, right hemisphere 7.6
1841 Female, age 85, right hemisphere 6.7
1847 Female, age 91, left hemisphere 6.3
Subiculum
nTPM: 9.0
2438 Female, age 94, left hemisphere 11.0
2619 Male, age 74, both hemispheres 10.2
2729 Female, age 91, right hemisphere 8.8
2042 Male, age 76, both hemispheres 8.6
1901 Male, age 80, both hemispheres 7.9
1977 Female, age 85, both hemispheres 7.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 21.4
Min nTPM: 4.6
Std nTPM: 1.9
Median nTPM: 11.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 16.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 15.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 15.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 15.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 14.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 14.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 13.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 13.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10153-102I9 76 years, female 43.7
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.7
Sample A Female 9.9
Sample B Female 8.7
Sample C Male 8.5
Sample D Male 7.7
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.5
Sample A Female 9.6
Sample B Female 7.5
Sample C Male 9.9
Sample D Male 8.7
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.7
Sample A Female 11.1
Sample B Female 7.8
Sample C Male 8.8
Sample D Male 7.7
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.8
Sample A Female 8.4
Sample B Female 7.8
Sample C Male 11.6
Sample D Male 9.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.6
Min nTPM: 14.0
Sample A Male 15.3
Sample B Male 14.3
Sample C Female 14.0
Sample D Female 16.6
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.8
Sample A Male 13.0
Sample B Male 14.7
Sample C Female 13.6
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69529077 Antisense, RP_050421_03_D11, Mouse strain C57BL/6J (56 days, male) 3.8

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