HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:860.7 nTPM
HPA:860.7 nTPM
GTEx:666.1 nTPM
FANTOM5:337.0 Scaled Tags Per Million
Pig:341.7 nTPM
Mouse:302.1 nTPM
Allen mouse:12.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003373
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 860.7
Sample id Sample description nTPM
Hippocampus
nTPM: 859.1
1898 Male, age 80, left hemisphere 880.2
1855 Male, age 76, left hemisphere 866.9
2529 Female, age 94, left hemisphere 864.8
2621 Female, age 67, right hemisphere 863.3
1911 Female, age 85, right hemisphere 846.9
2148 Female, age 91, left hemisphere 832.3
Dentate gyrus
nTPM: 850.0
2530 Female, age 94, left hemisphere 871.7
2010 Male, age 76, both hemispheres 871.1
2246 Female, age 85, both hemispheres 847.2
2531 Female, age 67, both hemispheres 840.2
2528 Male, age 74, both hemispheres 835.3
1927 Female, age 91, both hemispheres 834.7
Entorhinal gyrus
nTPM: 845.9
2686 Male, age 75, right hemisphere 857.3
1938 Female, age 85, left hemisphere 852.9
1787 Male, age 76, left hemisphere 851.9
2117 Female, age 91, right hemisphere 845.8
2764 Male, age 80, right hemisphere 841.1
2613 Female, age 94, left hemisphere 826.4
Hippocampus, CA1
nTPM: 849.1
2045 Male, age 76, both hemispheres 864.0
1873 Female, age 85, both hemispheres 858.6
2749 Male, age 80, left hemisphere 845.5
2527 Male, age 74, both hemispheres 839.3
2082 Female, age 91, right hemisphere 838.2
Hippocampus, CA2
nTPM: 853.4
1892 Male, age 76, both hemispheres 869.2
1963 Male, age 80, left hemisphere 861.7
1940 Female, age 85, left hemisphere 856.3
2437 Female, age 94, left hemisphere 852.2
2113 Female, age 91, right hemisphere 843.6
2249 Male, age 74, both hemispheres 837.6
Hippocampus, CA3
nTPM: 840.8
1867 Male, age 76, both hemispheres 868.1
1891 Female, age 85, both hemispheres 853.3
2436 Male, age 74, both hemispheres 841.3
2137 Male, age 80, left hemisphere 836.1
2861 Female, age 67, both hemispheres 833.3
2620 Female, age 94, left hemisphere 813.0
Parahippocampal cortex
nTPM: 847.5
2018 Male, age 76, both hemispheres 884.0
1850 Male, age 80, both hemispheres 867.4
2532 Female, age 72, left hemisphere 850.9
1990 Female, age 91, right hemisphere 849.3
1933 Female, age 85, both hemispheres 846.1
2250 Female, age 67, right hemisphere 846.1
2692 Male, age 74, both hemispheres 843.7
2245 Female, age 91, both hemispheres 841.9
2693 Female, age 94, both hemispheres 822.7
2622 Female, age 67, right hemisphere 822.6
Perirhinal gyrus
nTPM: 860.7
1841 Female, age 85, right hemisphere 868.8
1847 Female, age 91, left hemisphere 866.3
2848 Male, age 76, right hemisphere 864.8
1794 Male, age 80, right hemisphere 862.1
2521 Female, age 94, right hemisphere 841.4
Subiculum
nTPM: 856.9
2042 Male, age 76, both hemispheres 875.1
2438 Female, age 94, left hemisphere 870.0
1977 Female, age 85, both hemispheres 862.3
1901 Male, age 80, both hemispheres 853.9
2729 Female, age 91, right hemisphere 840.5
2619 Male, age 74, both hemispheres 839.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 666.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 666.1
Samples: 197

Max nTPM: 2134.0
Min nTPM: 370.3
Std nTPM: 201.6
Median nTPM: 622.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2134.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1512.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1324.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1233.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1196.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1153.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1137.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1038.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1009.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 993.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 981.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 337.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 337.0
FF:10169-103B7 60 years, female 456.2
FF:10153-102I9 76 years, female 217.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 341.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 341.7
Samples: 4

Max nTPM: 416.0
Min nTPM: 265.1
Sample A Female 416.0
Sample B Female 289.2
Sample C Male 396.6
Sample D Male 265.1
Entorhinal cortex
nTPM: 340.0
Samples: 4

Max nTPM: 420.9
Min nTPM: 271.3
Sample A Female 305.5
Sample B Female 420.9
Sample C Male 362.3
Sample D Male 271.3
Subiculum
nTPM: 329.1
Samples: 4

Max nTPM: 474.0
Min nTPM: 262.0
Sample A Female 474.0
Sample B Female 289.5
Sample C Male 262.0
Sample D Male 291.0
Ventral hippocampus
nTPM: 298.4
Samples: 4

Max nTPM: 318.9
Min nTPM: 260.7
Sample A Female 306.9
Sample B Female 260.7
Sample C Male 318.9
Sample D Male 307.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 302.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 300.7
Samples: 4

Max nTPM: 319.3
Min nTPM: 288.8
Sample A Male 294.1
Sample B Male 288.8
Sample C Female 319.3
Sample D Female 300.4
Hippocampal formation
nTPM: 302.1
Samples: 4

Max nTPM: 332.6
Min nTPM: 278.4
Sample A Male 332.6
Sample B Male 289.6
Sample C Female 307.7
Sample D Female 278.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
68441454 Antisense, RP_041214_02_D04, Mouse strain C57BL/6J (56 days, male) 14.6
74819237 Antisense, RP_060315_02_C01, Mouse strain C57BL/6J (56 days, male) 12.1
70813131 Antisense, RP_050712_03_C03, Mouse strain C57BL/6J (56 days, male) 12.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.