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RPL23
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:512.2 nTPM
GTEx:512.2 nTPM
FANTOM5:280.0 Scaled Tags Per Million
Pig:116.4 nTPM
Mouse:586.0 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 512.2
GTEx sample id Sample description nTPM
Retina
Average nTPM: 512.2
Samples: 105

Max nTPM: 704.1
Min nTPM: 374.6
Std nTPM: 76.9
Median nTPM:
384_1 83 years, male 704.1
379_1 60 years, male 699.4
35_1 74 years, female 657.6
307_1 66 years, female 646.0
153_1 70 years, female 645.6
17_1 71 years, male 638.1
375_1 74 years, female 628.9
218_1 71 years, female 624.9
452_1 88 years, female 622.5
2_1 77 years, female 621.7
4_1 88 years, female 617.2
246_1 77 years, male 613.3
389_1 86 years, female 611.6
308_1 70 years, female 609.1
145_1 84 years, male 608.8
321_1 62 years, female 605.8
120_1 70 years, female 603.2
237_1 82 years, male 601.9
173_1 67 years, male 600.7
495_1 57 years, female 599.0
322_1 76 years, male 595.1
376_1 75 years, female 592.0
347_1 72 years, male 590.7
126_1 63 years, male 584.8
189_1 76 years, male 584.4
315_1 62 years, female 582.0
137_1 83 years, male 574.1
41_1 94 years, female 569.4
447_1 81 years, male 565.3
311_1 78 years, male 557.4
119_1 70 years, female 553.4
396_1 62 years, male 545.7
162_1 79 years, female 543.3
42_1 85 years, male 541.1
320_1 89 years, female 540.6
139_1 64 years, female 537.4
501_1 88 years, male 536.5
377_1 82 years, female 534.0
386_1 76 years, male 532.2
414_1 84 years, female 529.7
526_1 61 years, male 525.8
265_1 87 years, male 525.1
319_1 81 years, male 523.5
109_1 81 years, female 522.8
18_1 88 years, male 521.5
217_1 76 years, male 520.8
142_1 61 years, female 514.5
117_1 61 years, male 513.8
404_1 82 years, female 511.4
405_1 91 years, male 508.9
6_1 73 years, female 508.5
394_1 75 years, female 504.9
177_1 74 years, male 503.6
316_1 62 years, male 502.9
314_1 67 years, male 502.1
518_1 75 years, female 501.4
499_1 55 years, female 500.8
317_1 60 years, male 499.8
491_1 89 years, female 492.9
313_1 79 years, female 491.8
89_1 63 years, male 491.4
295_1 61 years, female 490.3
266_1 85 years, male 486.0
99_1 64 years, male 484.5
415_1 77 years, female 480.2
466_1 57 years, female 478.8
351_1 91 years, male 475.4
348_1 84 years, male 474.9
81_1 67 years, male 473.8
115_1 83 years, male 470.4
229_1 69 years, female 465.7
349_1 83 years, male 465.6
243_1 75 years, male 464.1
254_1 77 years, female 462.7
264_1 73 years, female 462.6
355_1 70 years, female 460.7
324_1 76 years, male 460.0
468_1 89 years, male 458.1
335_1 73 years, female 455.2
172_1 72 years, female 451.9
406_1 79 years, male 451.6
490_1 67 years, female 450.5
163_1 78 years, male 450.4
503_1 68 years, male 447.0
354_1 81 years, female 443.6
288_1 66 years, female 441.0
506_1 65 years, male 440.7
291_1 76 years, male 438.4
293_1 68 years, female 434.5
318_1 68 years, male 433.0
480_1 63 years, male 429.4
32_1 67 years, male 424.7
353_1 82 years, female 421.5
413_1 59 years, female 417.0
251_1 78 years, male 413.4
425_1 59 years, female 411.8
149_1 88 years, male 400.4
517_1 88 years, male 398.8
350_1 84 years, female 393.5
292_1 71 years, male 387.4
43_1 64 years, female 383.7
356_1 87 years, female 382.3
9_1 66 years, female 381.7
352_1 62 years, male 377.3
286_1 68 years, female 374.6
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 280.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 280.0
FF:10030-101E3 24-65 years, mixed 280.0

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 116.4
Pig sample Sample description nTPM
Retina
nTPM: 116.5
Samples: 4

Max nTPM: 136.4
Min nTPM: 106.4
Sample A Female 112.1
Sample B Female 110.9
Sample C Male 136.4
Sample D Male 106.4

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 586.0
Mouse sample Sample description nTPM
Retina
nTPM: 586.0
Samples: 4

Max nTPM: 674.2
Min nTPM: 476.1
Sample A Male 603.0
Sample B Male 476.1
Sample C Female 674.2
Sample D Female 590.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.