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SNRPD2
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  • SNRPD2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:210.4 nTPM
FANTOM5:97.1 Scaled Tags Per Million
Pig:109.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041437
Glial cells High
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 210.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 210.4
Samples: 246

Max nTPM: 504.0
Min nTPM: 104.8
Std nTPM: 56.7
Median nTPM: 200.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 504.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 466.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 422.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 409.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 394.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 355.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 348.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 346.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 346.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 324.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 321.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 315.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 313.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 311.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 310.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 308.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 306.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 294.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 291.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 290.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 287.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 285.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 284.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 284.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 278.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 276.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 272.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 272.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 267.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 262.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 261.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 260.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 259.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 258.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 256.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 254.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 252.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 252.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 251.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 250.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 249.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 249.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 249.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 246.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 244.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 244.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 242.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 240.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 240.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 240.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 239.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 239.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 239.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 238.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 238.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 238.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 238.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 238.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 237.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 236.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 236.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 235.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 234.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 234.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 233.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 232.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 231.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 231.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 231.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 230.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 230.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 230.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 229.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 227.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 227.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 226.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 225.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 224.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 221.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 219.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 218.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 218.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 218.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 218.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 217.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 217.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 216.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 215.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 215.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 214.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 213.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 212.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 211.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 211.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 209.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 209.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 209.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 209.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 209.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 208.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 208.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 208.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 207.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 207.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 207.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 207.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 206.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 205.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 205.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 204.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 204.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 204.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 204.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 203.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 202.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 202.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 201.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 200.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 200.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 200.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 200.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 200.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 200.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 200.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 199.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 199.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 199.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 199.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 198.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 197.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 196.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 196.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 194.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 194.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 194.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 193.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 192.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 192.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 191.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 191.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 191.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 190.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 189.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 189.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 189.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 189.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 188.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 188.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 188.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 188.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 187.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 187.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 186.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 186.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 186.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 186.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 186.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 185.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 185.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 185.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 185.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 184.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 184.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 184.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 183.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 183.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 182.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 182.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 181.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 181.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 181.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 181.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 181.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 180.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 179.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 179.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 178.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 178.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 177.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 177.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 177.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 176.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 176.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 176.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 176.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 175.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 175.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 175.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 174.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 173.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 173.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 172.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 172.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 172.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 171.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 170.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 169.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 169.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 169.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 169.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 168.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 168.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 168.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 167.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 166.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 165.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 164.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 164.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 164.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 162.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 161.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 160.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 159.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 158.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 157.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 157.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 156.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 155.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 153.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 153.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 152.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 152.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 152.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 149.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 148.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 148.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 146.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 143.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 143.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 143.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 143.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 142.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 142.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 141.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 139.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 138.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 133.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 130.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 120.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 117.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 113.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 109.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 104.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 97.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 97.1
FF:10164-103B2 76 years, female 97.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 109.4
Pig sample Sample description nTPM
Caudate
nTPM: 109.4
Samples: 4

Max nTPM: 125.1
Min nTPM: 86.2
Sample A Female 104.1
Sample B Female 122.1
Sample C Male 125.1
Sample D Male 86.2

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