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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Neuronal projections: Medium
Synapses: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:96.6 nTPM
HPA:96.6 nTPM
GTEx:256.4 nTPM
FANTOM5:746.2 Scaled Tags Per Million
Pig:108.3 nTPM
Mouse:102.4 nTPM
Allen mouse:5.9 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA004802
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections Medium
Synapses Medium

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004802
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 96.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 50.2
1857 Female, age 85, left hemisphere 88.5
1854 Male, age 80, left hemisphere 71.8
2290 Female, age 72, unknown 60.6
1781 Male, age 74, unknown 44.5
2289 Male, age 61, right hemisphere 43.2
2288 Male, age 75, left hemisphere 38.1
2846 Female, age 79, unknown 36.1
2481 Female, age 94, left hemisphere 19.0
Claustrum
nTPM: 9.8
2196 Female, age 79, unknown 28.5
2284 Female, age 91, both hemispheres 9.9
2198 Male, age 80, both hemispheres 8.9
2568 Male, age 61, both hemispheres 8.4
2392 Female, age 94, both hemispheres 8.2
2491 Male, age 75, both hemispheres 7.8
1956 Male, age 74, unknown 6.0
2645 Female, age 72, unknown 6.0
2292 Female, age 85, both hemispheres 4.5
Globus pallidus, externus
nTPM: 7.4
2395 Male, age 75, both hemispheres 10.9
2646 Male, age 61, right hemisphere 9.7
2567 Female, age 72, unknown 5.5
2772 Female, age 79, unknown 5.5
1996 Male, age 80, right hemisphere 5.2
Globus pallidus, internus
nTPM: 6.3
2483 Female, age 94, right hemisphere 13.9
2287 Male, age 75, right hemisphere 7.0
2566 Female, age 72, unknown 5.9
2037 Male, age 80, right hemisphere 4.8
1818 Male, age 74, unknown 4.6
2778 Female, age 91, both hemispheres 4.3
2111 Female, age 85, right hemisphere 3.1
Nucleus accumbens
nTPM: 96.6
1856 Female, age 91, right hemisphere 257.1
2824 Male, age 61, right hemisphere 125.5
1806 Female, age 85, left hemisphere 104.3
1783 Male, age 74, unknown 92.7
2698 Female, age 72, unknown 84.3
2286 Male, age 75, left hemisphere 47.4
2732 Male, age 80, right hemisphere 43.5
2391 Female, age 94, left hemisphere 18.0
Nucleus basalis of Meynert
nTPM: 28.2
2393 Male, age 80, right hemisphere 45.6
2484 Female, age 94, left hemisphere 29.3
2821 Male, age 75, both hemispheres 25.5
2569 Male, age 61, both hemispheres 12.2
Nucleus of the diagonal band
nTPM: 27.1
1812 Female, age 91, both hemispheres 46.0
1979 Male, age 74, unknown 24.2
2195 Female, age 85, both hemispheres 23.5
2029 Male, age 61, right hemisphere 21.1
2775 Male, age 80, right hemisphere 20.9
Olfactory tubercle
nTPM: 17.3
1846 Male, age 80, right hemisphere 28.2
1998 Female, age 91, both hemispheres 14.3
2487 Female, age 94, left hemisphere 14.1
2856 Male, age 75, right hemisphere 12.5
Putamen
nTPM: 56.1
1937 Female, age 91, right hemisphere 155.8
1838 Male, age 80, right hemisphere 102.4
1829 Male, age 74, unknown 38.6
2466 Female, age 79, unknown 31.7
2482 Female, age 94, left hemisphere 22.2
2489 Female, age 72, unknown 21.0
2647 Male, age 75, left hemisphere 20.8
Septal nuclei
nTPM: 19.2
2009 Female, age 91, both hemispheres 28.1
1960 Male, age 74, unknown 27.7
2031 Female, age 72, unknown 24.5
2059 Female, age 85, both hemispheres 19.1
2394 Male, age 61, left hemisphere 15.2
2629 Female, age 94, right hemisphere 14.9
2199 Male, age 80, right hemisphere 4.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 256.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 126.8
Samples: 246

Max nTPM: 377.8
Min nTPM: 3.0
Std nTPM: 87.0
Median nTPM: 112.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 377.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 367.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 343.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 340.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 338.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 329.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 327.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 322.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 318.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 306.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 306.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 303.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 300.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 296.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 293.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 293.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 283.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 280.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 272.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 269.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 259.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 259.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 258.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 253.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 251.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 249.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 245.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 238.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 237.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 235.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 235.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 233.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 229.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 227.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 225.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 223.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 221.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 219.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 217.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 215.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 214.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 210.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 209.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 208.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 207.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 206.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 205.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 204.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 203.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 202.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 202.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 202.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 201.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 197.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 195.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 195.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 195.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 192.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 190.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 189.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 188.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 187.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 184.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 184.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 183.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 182.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 182.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 182.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 180.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 179.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 176.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 171.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 171.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 168.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 167.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 167.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 165.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 164.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 163.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 163.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 158.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 157.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 156.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 153.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 153.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 152.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 148.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 147.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 145.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 145.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 143.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 143.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 141.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 140.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 140.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 139.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 139.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 137.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 136.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 133.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 132.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 130.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 130.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 130.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 129.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 129.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 129.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 128.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 124.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 124.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 122.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 121.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 121.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 119.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 117.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 116.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 115.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 115.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 115.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 114.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 113.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 113.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 112.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 110.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 108.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 107.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 104.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 103.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 103.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 103.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 103.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 103.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 102.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 102.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 102.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 99.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 97.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 97.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 96.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 95.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 95.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 94.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 94.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 92.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 91.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 90.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 89.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 89.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 89.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 88.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 87.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 85.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 82.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 79.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 78.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 71.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 71.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 70.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 69.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 68.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 68.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 65.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 64.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 63.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 61.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 57.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 54.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 54.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 51.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 50.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 49.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 46.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 45.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 43.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 41.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 41.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 40.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 39.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 36.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 36.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 36.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 35.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 35.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 34.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 33.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 32.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 32.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 32.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 31.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 29.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 29.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 28.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 28.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 28.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 27.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 26.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 25.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 25.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 24.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 24.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 24.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 23.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 22.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 19.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 18.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 17.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 14.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 14.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 14.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 256.4
Samples: 246

Max nTPM: 684.4
Min nTPM: 2.1
Std nTPM: 148.6
Median nTPM: 272.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 684.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 577.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 569.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 567.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 537.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 506.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 500.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 485.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 485.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 484.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 483.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 481.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 481.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 480.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 479.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 475.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 470.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 469.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 467.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 463.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 462.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 456.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 453.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 449.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 447.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 442.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 441.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 440.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 439.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 437.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 435.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 431.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 431.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 431.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 425.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 422.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 421.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 418.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 418.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 417.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 416.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 415.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 411.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 410.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 409.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 407.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 406.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 406.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 405.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 405.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 402.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 400.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 398.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 391.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 388.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 385.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 384.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 371.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 369.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 369.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 368.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 367.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 365.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 363.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 363.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 361.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 360.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 359.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 357.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 354.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 354.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 351.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 349.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 348.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 344.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 343.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 341.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 337.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 336.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 336.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 336.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 334.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 331.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 331.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 330.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 328.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 326.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 326.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 326.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 324.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 323.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 321.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 319.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 318.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 314.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 313.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 312.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 311.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 309.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 308.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 305.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 305.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 301.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 300.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 300.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 299.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 298.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 297.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 296.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 296.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 296.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 292.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 289.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 287.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 286.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 284.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 280.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 274.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 274.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 273.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 273.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 272.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 272.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 272.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 266.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 262.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 259.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 258.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 257.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 255.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 254.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 251.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 251.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 246.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 245.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 243.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 243.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 242.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 240.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 240.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 239.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 236.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 235.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 232.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 230.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 222.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 222.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 221.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 215.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 214.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 213.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 210.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 210.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 209.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 207.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 206.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 203.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 199.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 196.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 190.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 190.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 188.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 186.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 172.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 171.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 167.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 167.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 165.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 163.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 163.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 161.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 159.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 153.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 153.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 153.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 149.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 147.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 146.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 145.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 143.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 142.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 141.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 138.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 127.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 127.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 124.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 118.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 109.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 108.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 108.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 107.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 105.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 104.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 101.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 97.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 97.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 97.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 91.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 85.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 83.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 79.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 79.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 73.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 71.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 69.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 69.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 68.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 67.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 67.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 67.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 66.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 64.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 63.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 62.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 62.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 60.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 58.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 56.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 55.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 53.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 40.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 38.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 37.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 36.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 35.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 35.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 30.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 28.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 26.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 24.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 22.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 21.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 18.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 16.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 16.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 11.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 10.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.1
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Brain - Putamen (basal ganglia)
Average nTPM: 107.6
Samples: 205

Max nTPM: 440.7
Min nTPM: 4.8
Std nTPM: 84.9
Median nTPM: 87.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 440.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 342.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 336.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 333.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 328.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 297.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 297.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 296.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 292.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 289.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 273.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 269.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 266.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 266.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 264.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 256.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 247.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 240.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 237.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 224.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 222.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 219.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 216.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 212.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 212.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 210.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 208.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 206.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 205.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 203.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 201.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 199.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 198.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 194.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 194.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 193.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 191.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 189.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 187.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 186.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 184.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 183.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 177.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 176.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 172.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 170.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 169.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 166.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 161.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 160.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 156.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 155.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 154.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 150.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 148.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 147.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 146.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 145.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 145.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 140.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 140.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 138.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 137.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 136.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 135.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 135.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 135.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 134.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 134.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 134.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 133.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 129.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 127.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 126.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 124.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 122.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 118.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 118.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 117.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 113.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 110.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 108.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 105.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 104.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 103.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 103.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 102.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 100.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 100.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 100.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 100.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 99.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 98.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 98.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 96.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 96.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 95.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 95.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 94.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 93.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 91.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 88.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 87.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 83.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 82.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 80.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 80.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 80.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 79.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 79.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 79.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 79.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 78.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 78.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 75.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 75.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 73.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 73.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 71.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 70.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 64.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 63.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 62.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 62.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 59.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 58.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 57.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 57.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 54.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 54.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 52.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 50.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 47.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 46.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 45.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 45.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 44.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 43.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 40.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 40.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 36.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 36.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 35.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 35.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 33.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 32.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 32.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 32.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 32.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 32.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 31.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 31.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 31.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 30.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 29.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 29.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 27.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 27.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 25.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 25.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 25.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 24.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 24.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 23.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 22.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 22.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 21.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 20.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 19.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 19.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 18.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 17.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 15.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 12.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 10.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 10.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 746.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 519.4
FF:10164-103B2 76 years, female 519.4
Globus pallidus
Scaled Tags Per Million: 64.4
FF:10175-103C4 60 years, female 108.9
FF:10161-103A8 76 years, female 19.8
Nucleus accumbens
Scaled Tags Per Million: 239.9
FF:10037-101F1 23-56 years, mixed 239.9
Putamen
Scaled Tags Per Million: 746.2
FF:10176-103C5 60 years, female 746.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 108.3
Pig sample Sample description nTPM
Caudate
nTPM: 108.4
Samples: 4

Max nTPM: 130.5
Min nTPM: 90.2
Sample A Female 90.2
Sample B Female 106.0
Sample C Male 130.5
Sample D Male 106.7
Putamen
nTPM: 91.2
Samples: 4

Max nTPM: 139.7
Min nTPM: 25.4
Sample A Female 25.4
Sample B Female 96.9
Sample C Male 139.7
Sample D Male 102.8
Septum
nTPM: 46.2
Samples: 4

Max nTPM: 83.7
Min nTPM: 5.5
Sample A Female 80.4
Sample B Female 83.7
Sample C Male 5.5
Sample D Male 15.1
Ventral pallidum
nTPM: 70.5
Samples: 4

Max nTPM: 113.0
Min nTPM: 15.1
Sample A Female 82.5
Sample B Female 113.0
Sample C Male 15.1
Sample D Male 71.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 102.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 102.4
Samples: 4

Max nTPM: 114.3
Min nTPM: 83.9
Sample A Male 110.9
Sample B Male 114.3
Sample C Female 83.9
Sample D Female 100.6
Septum
nTPM: 38.8
Samples: 4

Max nTPM: 46.3
Min nTPM: 29.1
Sample A Male 45.2
Sample B Male 46.3
Sample C Female 34.6
Sample D Female 29.1
Ventral forebrain
nTPM: 89.5
Samples: 4

Max nTPM: 96.0
Min nTPM: 76.7
Sample A Male 90.4
Sample B Male 96.0
Sample C Female 95.0
Sample D Female 76.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.9
70927827 Antisense, RP_050725_01_B03, Mouse strain C57BL/6J (56 days, male) 7.4
413779 Antisense, RP_040809_01_C11, Mouse strain C57BL/6J (56 days, male) 4.3
Pallidum
Expression energy: 2.1
70927827 Antisense, RP_050725_01_B03, Mouse strain C57BL/6J (56 days, male) 2.2
413779 Antisense, RP_040809_01_C11, Mouse strain C57BL/6J (56 days, male) 2.1

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