HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.0 nTPM
HPA:55.0 nTPM
GTEx:45.7 nTPM
FANTOM5:100.6 Scaled Tags Per Million
Pig:148.6 nTPM
Mouse:45.7 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003474Antibody CAB000328
Glial cells LowMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.0
Sample id Sample description nTPM
Hippocampus
nTPM: 53.7
1855 Male, age 76, left hemisphere 55.2
1898 Male, age 80, left hemisphere 54.7
2148 Female, age 91, left hemisphere 53.8
2529 Female, age 94, left hemisphere 53.5
1911 Female, age 85, right hemisphere 52.7
2621 Female, age 67, right hemisphere 52.4
Dentate gyrus
nTPM: 52.4
2530 Female, age 94, left hemisphere 56.0
2010 Male, age 76, both hemispheres 54.7
2531 Female, age 67, both hemispheres 51.9
1927 Female, age 91, both hemispheres 51.2
2246 Female, age 85, both hemispheres 51.2
2528 Male, age 74, both hemispheres 49.6
Entorhinal gyrus
nTPM: 52.6
2117 Female, age 91, right hemisphere 55.5
2686 Male, age 75, right hemisphere 54.6
1787 Male, age 76, left hemisphere 53.9
2764 Male, age 80, right hemisphere 52.3
1938 Female, age 85, left hemisphere 50.9
2613 Female, age 94, left hemisphere 48.1
Hippocampus, CA1
nTPM: 53.0
2749 Male, age 80, left hemisphere 55.1
2045 Male, age 76, both hemispheres 54.1
2527 Male, age 74, both hemispheres 53.3
2082 Female, age 91, right hemisphere 51.6
1873 Female, age 85, both hemispheres 50.9
Hippocampus, CA2
nTPM: 53.0
2437 Female, age 94, left hemisphere 56.0
2113 Female, age 91, right hemisphere 53.7
2249 Male, age 74, both hemispheres 53.6
1963 Male, age 80, left hemisphere 52.8
1892 Male, age 76, both hemispheres 51.2
1940 Female, age 85, left hemisphere 50.7
Hippocampus, CA3
nTPM: 51.2
2137 Male, age 80, left hemisphere 55.7
2861 Female, age 67, both hemispheres 52.2
1891 Female, age 85, both hemispheres 52.0
2620 Female, age 94, left hemisphere 50.1
1867 Male, age 76, both hemispheres 49.0
2436 Male, age 74, both hemispheres 48.0
Parahippocampal cortex
nTPM: 52.8
2532 Female, age 72, left hemisphere 57.1
2245 Female, age 91, both hemispheres 56.4
2692 Male, age 74, both hemispheres 55.7
2018 Male, age 76, both hemispheres 54.4
2250 Female, age 67, right hemisphere 53.1
2622 Female, age 67, right hemisphere 52.0
1933 Female, age 85, both hemispheres 50.8
1850 Male, age 80, both hemispheres 50.7
1990 Female, age 91, right hemisphere 49.8
2693 Female, age 94, both hemispheres 48.0
Perirhinal gyrus
nTPM: 50.7
2521 Female, age 94, right hemisphere 51.8
1841 Female, age 85, right hemisphere 51.7
2848 Male, age 76, right hemisphere 51.2
1847 Female, age 91, left hemisphere 50.5
1794 Male, age 80, right hemisphere 48.2
Subiculum
nTPM: 55.0
2438 Female, age 94, left hemisphere 62.3
1901 Male, age 80, both hemispheres 54.6
2042 Male, age 76, both hemispheres 54.5
2729 Female, age 91, right hemisphere 54.2
2619 Male, age 74, both hemispheres 53.0
1977 Female, age 85, both hemispheres 51.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.7
Samples: 197

Max nTPM: 75.7
Min nTPM: 30.1
Std nTPM: 8.7
Median nTPM: 44.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 75.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 74.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 71.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 71.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 69.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 68.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 68.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 66.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 66.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 66.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 63.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.6
FF:10153-102I9 76 years, female 138.5
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 148.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 148.7
Samples: 4

Max nTPM: 177.5
Min nTPM: 109.7
Sample A Female 177.5
Sample B Female 135.1
Sample C Male 172.3
Sample D Male 109.7
Entorhinal cortex
nTPM: 148.3
Samples: 4

Max nTPM: 156.7
Min nTPM: 138.5
Sample A Female 149.4
Sample B Female 156.7
Sample C Male 138.5
Sample D Male 148.7
Subiculum
nTPM: 123.9
Samples: 4

Max nTPM: 149.7
Min nTPM: 111.3
Sample A Female 149.7
Sample B Female 120.2
Sample C Male 111.3
Sample D Male 114.5
Ventral hippocampus
nTPM: 132.9
Samples: 4

Max nTPM: 157.5
Min nTPM: 109.0
Sample A Female 128.2
Sample B Female 109.0
Sample C Male 157.5
Sample D Male 136.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.6
Samples: 4

Max nTPM: 47.8
Min nTPM: 40.7
Sample A Male 43.7
Sample B Male 47.8
Sample C Female 46.0
Sample D Female 40.7
Hippocampal formation
nTPM: 45.7
Samples: 4

Max nTPM: 53.7
Min nTPM: 40.6
Sample A Male 43.2
Sample B Male 45.2
Sample C Female 53.7
Sample D Female 40.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
69289333 Antisense, RP_050407_03_A03, Mouse strain C57BL/6J (56 days, male) 8.2

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