HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.0 nTPM
HPA:39.0 nTPM
GTEx:33.6 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:63.8 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041332Antibody HPA065768Antibody CAB034415
Glial cells MediumLowNot detected
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.0
Sample id Sample description nTPM
Hippocampus
nTPM: 38.1
2529 Female, age 94, left hemisphere 39.7
1898 Male, age 80, left hemisphere 39.3
1911 Female, age 85, right hemisphere 37.8
2621 Female, age 67, right hemisphere 37.7
1855 Male, age 76, left hemisphere 37.2
2148 Female, age 91, left hemisphere 36.7
Dentate gyrus
nTPM: 37.5
2530 Female, age 94, left hemisphere 38.9
2246 Female, age 85, both hemispheres 38.2
2010 Male, age 76, both hemispheres 37.9
2528 Male, age 74, both hemispheres 37.5
1927 Female, age 91, both hemispheres 36.7
2531 Female, age 67, both hemispheres 36.1
Entorhinal gyrus
nTPM: 38.2
2117 Female, age 91, right hemisphere 39.9
1938 Female, age 85, left hemisphere 39.7
2764 Male, age 80, right hemisphere 38.3
1787 Male, age 76, left hemisphere 38.2
2686 Male, age 75, right hemisphere 36.9
2613 Female, age 94, left hemisphere 36.0
Hippocampus, CA1
nTPM: 38.2
2749 Male, age 80, left hemisphere 40.2
2527 Male, age 74, both hemispheres 39.5
1873 Female, age 85, both hemispheres 37.9
2082 Female, age 91, right hemisphere 36.8
2045 Male, age 76, both hemispheres 36.7
Hippocampus, CA2
nTPM: 38.4
1940 Female, age 85, left hemisphere 39.0
1963 Male, age 80, left hemisphere 39.0
2249 Male, age 74, both hemispheres 38.7
1892 Male, age 76, both hemispheres 38.5
2113 Female, age 91, right hemisphere 37.8
2437 Female, age 94, left hemisphere 37.6
Hippocampus, CA3
nTPM: 38.0
2137 Male, age 80, left hemisphere 39.4
2436 Male, age 74, both hemispheres 39.3
1891 Female, age 85, both hemispheres 39.1
1867 Male, age 76, both hemispheres 39.0
2620 Female, age 94, left hemisphere 35.9
2861 Female, age 67, both hemispheres 35.5
Parahippocampal cortex
nTPM: 38.7
1850 Male, age 80, both hemispheres 40.2
2532 Female, age 72, left hemisphere 40.2
1990 Female, age 91, right hemisphere 39.3
1933 Female, age 85, both hemispheres 39.1
2018 Male, age 76, both hemispheres 39.1
2250 Female, age 67, right hemisphere 38.8
2245 Female, age 91, both hemispheres 38.5
2692 Male, age 74, both hemispheres 37.9
2693 Female, age 94, both hemispheres 37.3
2622 Female, age 67, right hemisphere 36.7
Perirhinal gyrus
nTPM: 39.0
1794 Male, age 80, right hemisphere 39.8
1841 Female, age 85, right hemisphere 39.4
1847 Female, age 91, left hemisphere 39.1
2521 Female, age 94, right hemisphere 38.4
2848 Male, age 76, right hemisphere 38.2
Subiculum
nTPM: 39.0
2042 Male, age 76, both hemispheres 41.0
1901 Male, age 80, both hemispheres 40.1
1977 Female, age 85, both hemispheres 39.6
2438 Female, age 94, left hemisphere 38.8
2619 Male, age 74, both hemispheres 37.5
2729 Female, age 91, right hemisphere 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 69.3
Min nTPM: 20.1
Std nTPM: 7.6
Median nTPM: 32.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 69.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 63.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 57.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 52.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 51.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 50.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 48.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 47.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 47.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.3
FF:10169-103B7 60 years, female 124.5
FF:10153-102I9 76 years, female 110.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 30.3
Min nTPM: 19.6
Sample A Female 30.3
Sample B Female 23.0
Sample C Male 24.8
Sample D Male 19.6
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 18.5
Sample A Female 21.8
Sample B Female 24.2
Sample C Male 20.8
Sample D Male 18.5
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 27.9
Min nTPM: 18.4
Sample A Female 27.9
Sample B Female 18.9
Sample C Male 18.4
Sample D Male 20.6
Ventral hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.2
Sample A Female 23.8
Sample B Female 18.2
Sample C Male 18.9
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.2
Samples: 4

Max nTPM: 61.8
Min nTPM: 54.3
Sample A Male 54.3
Sample B Male 60.8
Sample C Female 61.8
Sample D Female 55.9
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 71.3
Min nTPM: 58.9
Sample A Male 71.3
Sample B Male 62.6
Sample C Female 62.4
Sample D Female 58.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
512771 Antisense, RP_040809_02_D09, Mouse strain C57BL/6J (56 days, male) 8.0

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