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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:170.2 nTPM
HPA:170.2 nTPM
GTEx:132.5 nTPM
FANTOM5:42.6 Scaled Tags Per Million
Pig:118.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 170.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 167.7
1981 Female, age 72, midline 181.3
2194 Female, age 79, both hemispheres 166.9
2816 Male, age 47, midline 166.7
2565 Male, age 75, midline 163.5
2048 Male, age 55, midline 159.9
Cervical spinal cord, dorsal horn
nTPM: 170.2
2173 Female, age 72, unknown 185.7
2296 Male, age 66, both hemispheres 174.5
2069 Male, age 47, both hemispheres 173.0
1877 Male, age 55, unknown 168.0
2297 Male, age 75, both hemispheres 161.5
2721 Male, age 90, both hemispheres 158.3
Cervical spinal cord, ventral horn
nTPM: 169.8
2098 Female, age 72, unknown 180.0
2809 Male, age 90, both hemispheres 175.2
2480 Male, age 75, both hemispheres 172.3
2068 Male, age 55, unknown 169.0
2295 Male, age 66, both hemispheres 162.5
2820 Female, age 79, both hemispheres 159.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 132.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 132.5
Samples: 159

Max nTPM: 241.3
Min nTPM: 53.1
Std nTPM: 34.9
Median nTPM: 125.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 241.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 237.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 236.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 235.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 215.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 210.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 201.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 196.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 194.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 191.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 189.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 188.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 187.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 185.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 181.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 181.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 180.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 180.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 178.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 175.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 171.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 171.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 170.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 169.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 169.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 169.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 168.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 165.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 165.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 164.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 164.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 163.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 162.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 159.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 157.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 156.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 155.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 154.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 154.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 153.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 153.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 151.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 150.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 147.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 144.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 143.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 142.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 142.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 142.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 141.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 140.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 140.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 140.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 139.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 139.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 138.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 137.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 136.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 136.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 136.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 135.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 135.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 135.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 135.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 134.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 134.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 133.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 132.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 131.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 131.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 130.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 130.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 130.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 129.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 128.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 127.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 127.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 127.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 126.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 125.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 125.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 125.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 124.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 124.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 123.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 122.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 121.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 121.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 121.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 120.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 119.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 119.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 119.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 119.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 118.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 117.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 117.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 117.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 116.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 115.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 115.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 115.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 114.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 114.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 113.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 113.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 112.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 112.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 112.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 112.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 111.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 111.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 111.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 110.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 110.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 110.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 109.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 109.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 109.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 109.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 108.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 107.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 107.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 106.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 105.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 105.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 105.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 105.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 104.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 104.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 104.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 103.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 103.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 103.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 103.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 102.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 101.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 101.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 101.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 101.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 100.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 97.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 97.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 97.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 97.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 95.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 94.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 92.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 89.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 88.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 85.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 84.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 82.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 79.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 76.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 71.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 67.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 65.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 53.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 42.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 42.6
FF:10181-103D1 60 years, female 57.5
FF:10159-103A6 76 years, female 27.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 118.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 110.3
Samples: 4

Max nTPM: 148.3
Min nTPM: 85.8
Sample A Female 103.3
Sample B Female 103.6
Sample C Male 148.3
Sample D Male 85.8
Ventral spinal cord
nTPM: 118.1
Samples: 4

Max nTPM: 135.9
Min nTPM: 98.3
Sample A Female 98.3
Sample B Female 135.9
Sample C Male 132.5
Sample D Male 105.5

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