HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:340.4 nTPM
HPA:340.4 nTPM
GTEx:324.2 nTPM
FANTOM5:178.2 Scaled Tags Per Million
Pig:71.6 nTPM
Mouse:288.6 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037915Antibody HPA037916Antibody CAB008661
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 340.4
Sample id Sample description nTPM
Hippocampus
nTPM: 325.7
1898 Male, age 80, left hemisphere 345.3
2621 Female, age 67, right hemisphere 331.9
2529 Female, age 94, left hemisphere 331.8
1855 Male, age 76, left hemisphere 321.8
2148 Female, age 91, left hemisphere 320.5
1911 Female, age 85, right hemisphere 302.9
Dentate gyrus
nTPM: 324.8
2010 Male, age 76, both hemispheres 343.3
2530 Female, age 94, left hemisphere 339.7
1927 Female, age 91, both hemispheres 324.7
2246 Female, age 85, both hemispheres 319.8
2528 Male, age 74, both hemispheres 313.2
2531 Female, age 67, both hemispheres 307.9
Entorhinal gyrus
nTPM: 322.8
2764 Male, age 80, right hemisphere 338.1
1787 Male, age 76, left hemisphere 329.7
1938 Female, age 85, left hemisphere 325.3
2117 Female, age 91, right hemisphere 318.4
2686 Male, age 75, right hemisphere 317.2
2613 Female, age 94, left hemisphere 308.4
Hippocampus, CA1
nTPM: 334.0
2749 Male, age 80, left hemisphere 362.6
2082 Female, age 91, right hemisphere 331.3
2045 Male, age 76, both hemispheres 327.8
2527 Male, age 74, both hemispheres 327.8
1873 Female, age 85, both hemispheres 320.6
Hippocampus, CA2
nTPM: 336.2
2249 Male, age 74, both hemispheres 360.0
1892 Male, age 76, both hemispheres 343.7
1940 Female, age 85, left hemisphere 335.8
1963 Male, age 80, left hemisphere 331.3
2437 Female, age 94, left hemisphere 328.9
2113 Female, age 91, right hemisphere 317.7
Hippocampus, CA3
nTPM: 331.2
2436 Male, age 74, both hemispheres 386.4
1867 Male, age 76, both hemispheres 331.9
2137 Male, age 80, left hemisphere 326.3
2861 Female, age 67, both hemispheres 318.6
2620 Female, age 94, left hemisphere 313.3
1891 Female, age 85, both hemispheres 311.0
Parahippocampal cortex
nTPM: 329.2
1850 Male, age 80, both hemispheres 344.9
2245 Female, age 91, both hemispheres 342.7
2250 Female, age 67, right hemisphere 334.3
2532 Female, age 72, left hemisphere 331.5
2018 Male, age 76, both hemispheres 330.5
1933 Female, age 85, both hemispheres 327.6
1990 Female, age 91, right hemisphere 325.6
2622 Female, age 67, right hemisphere 325.5
2692 Male, age 74, both hemispheres 320.9
2693 Female, age 94, both hemispheres 308.7
Perirhinal gyrus
nTPM: 340.4
1794 Male, age 80, right hemisphere 360.0
1847 Female, age 91, left hemisphere 352.0
1841 Female, age 85, right hemisphere 332.7
2521 Female, age 94, right hemisphere 331.7
2848 Male, age 76, right hemisphere 325.6
Subiculum
nTPM: 319.4
2438 Female, age 94, left hemisphere 327.2
1901 Male, age 80, both hemispheres 327.1
1977 Female, age 85, both hemispheres 322.1
2619 Male, age 74, both hemispheres 320.5
2042 Male, age 76, both hemispheres 315.4
2729 Female, age 91, right hemisphere 303.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 324.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 324.2
Samples: 197

Max nTPM: 947.8
Min nTPM: 124.3
Std nTPM: 106.9
Median nTPM: 302.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 947.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 686.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 649.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 646.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 589.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 579.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 544.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 538.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 537.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 525.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 510.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 178.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 178.2
FF:10169-103B7 60 years, female 231.2
FF:10153-102I9 76 years, female 125.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 117.2
Min nTPM: 44.3
Sample A Female 117.2
Sample B Female 59.6
Sample C Male 65.5
Sample D Male 44.3
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 83.5
Min nTPM: 43.0
Sample A Female 83.5
Sample B Female 79.3
Sample C Male 56.9
Sample D Male 43.0
Subiculum
nTPM: 62.7
Samples: 4

Max nTPM: 106.4
Min nTPM: 38.7
Sample A Female 106.4
Sample B Female 55.9
Sample C Male 49.6
Sample D Male 38.7
Ventral hippocampus
nTPM: 66.5
Samples: 4

Max nTPM: 93.9
Min nTPM: 46.0
Sample A Female 93.9
Sample B Female 48.5
Sample C Male 77.7
Sample D Male 46.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 288.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 247.1
Samples: 4

Max nTPM: 275.6
Min nTPM: 226.2
Sample A Male 240.5
Sample B Male 246.0
Sample C Female 275.6
Sample D Female 226.2
Hippocampal formation
nTPM: 288.6
Samples: 4

Max nTPM: 311.4
Min nTPM: 267.5
Sample A Male 311.4
Sample B Male 267.5
Sample C Female 279.7
Sample D Female 295.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
69817270 Antisense, RP_050510_03_A05, Mouse strain C57BL/6J (56 days, male) 7.8
76115740 Antisense, RP_060620_02_C08, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

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