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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:345.7 nTPM
FANTOM5:168.5 Scaled Tags Per Million
Pig:49.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA037915Antibody HPA037916Antibody CAB008661
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedMediumMedium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 345.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 345.7
Samples: 246

Max nTPM: 772.9
Min nTPM: 159.6
Std nTPM: 93.6
Median nTPM: 328.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 772.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 746.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 732.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 670.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 612.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 605.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 575.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 557.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 555.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 550.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 534.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 533.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 519.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 509.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 492.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 491.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 491.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 485.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 485.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 482.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 466.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 466.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 455.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 455.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 454.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 450.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 449.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 447.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 444.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 443.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 441.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 437.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 433.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 432.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 431.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 431.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 430.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 429.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 425.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 423.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 420.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 420.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 419.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 418.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 417.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 414.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 414.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 411.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 409.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 407.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 404.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 404.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 402.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 399.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 399.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 398.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 397.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 394.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 391.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 389.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 389.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 387.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 387.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 382.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 374.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 374.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 374.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 373.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 372.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 371.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 370.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 369.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 368.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 367.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 365.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 365.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 365.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 363.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 361.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 360.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 359.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 359.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 358.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 358.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 357.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 354.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 352.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 352.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 350.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 349.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 347.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 347.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 347.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 346.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 345.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 342.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 340.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 340.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 339.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 339.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 339.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 337.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 337.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 337.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 337.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 337.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 334.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 334.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 334.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 334.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 333.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 333.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 332.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 331.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 331.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 330.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 330.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 330.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 330.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 329.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 329.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 328.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 328.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 327.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 327.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 325.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 324.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 324.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 323.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 323.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 323.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 323.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 323.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 322.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 322.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 322.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 321.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 321.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 320.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 319.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 319.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 319.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 318.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 318.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 317.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 316.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 316.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 315.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 315.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 314.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 314.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 314.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 313.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 313.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 312.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 311.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 311.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 311.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 310.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 309.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 309.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 309.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 308.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 307.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 306.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 306.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 305.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 304.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 303.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 302.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 302.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 301.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 300.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 299.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 299.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 298.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 297.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 297.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 296.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 293.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 293.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 292.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 292.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 290.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 290.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 290.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 289.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 288.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 287.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 287.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 286.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 284.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 283.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 283.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 282.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 282.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 281.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 280.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 280.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 276.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 275.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 275.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 275.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 272.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 271.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 271.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 270.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 269.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 269.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 268.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 265.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 265.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 264.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 262.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 259.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 257.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 255.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 254.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 253.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 252.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 252.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 251.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 249.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 246.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 245.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 241.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 240.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 240.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 236.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 236.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 229.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 228.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 225.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 217.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 213.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 212.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 211.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 210.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 209.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 205.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 194.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 186.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 185.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 184.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 177.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 159.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 168.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 168.5
FF:10164-103B2 76 years, female 168.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 49.0
Pig sample Sample description nTPM
Caudate
nTPM: 49.0
Samples: 4

Max nTPM: 52.8
Min nTPM: 40.8
Sample A Female 51.0
Sample B Female 51.4
Sample C Male 52.8
Sample D Male 40.8

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