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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 260.9
Min nTPM: 50.6
Std nTPM: 29.1
Median nTPM:
413_1
59 years, female
260.9
81_1
67 years, male
168.6
324_1
76 years, male
168.4
142_1
61 years, female
163.9
501_1
88 years, male
159.2
120_1
70 years, female
157.6
491_1
89 years, female
157.0
41_1
94 years, female
154.8
348_1
84 years, male
154.1
396_1
62 years, male
153.5
316_1
62 years, male
152.2
313_1
79 years, female
146.9
149_1
88 years, male
146.8
447_1
81 years, male
146.4
452_1
88 years, female
145.1
119_1
70 years, female
143.6
237_1
82 years, male
141.9
139_1
64 years, female
141.1
43_1
64 years, female
141.0
229_1
69 years, female
139.6
254_1
77 years, female
138.5
404_1
82 years, female
134.6
377_1
82 years, female
132.5
490_1
67 years, female
132.5
35_1
74 years, female
130.1
414_1
84 years, female
130.1
89_1
63 years, male
128.5
265_1
87 years, male
128.5
172_1
72 years, female
127.9
162_1
79 years, female
127.4
322_1
76 years, male
125.7
375_1
74 years, female
125.4
415_1
77 years, female
125.0
386_1
76 years, male
124.5
4_1
88 years, female
124.4
288_1
66 years, female
123.5
314_1
67 years, male
123.5
115_1
83 years, male
122.9
311_1
78 years, male
122.8
177_1
74 years, male
120.8
145_1
84 years, male
120.3
109_1
81 years, female
119.8
17_1
71 years, male
118.4
2_1
77 years, female
118.2
173_1
67 years, male
117.4
291_1
76 years, male
115.8
6_1
73 years, female
114.5
353_1
82 years, female
112.2
18_1
88 years, male
111.9
506_1
65 years, male
111.9
315_1
62 years, female
111.5
117_1
61 years, male
110.7
251_1
78 years, male
110.4
266_1
85 years, male
108.7
286_1
68 years, female
108.6
379_1
60 years, male
108.4
163_1
78 years, male
108.3
42_1
85 years, male
107.4
405_1
91 years, male
107.1
518_1
75 years, female
107.1
321_1
62 years, female
106.8
189_1
76 years, male
104.6
347_1
72 years, male
104.6
355_1
70 years, female
104.6
32_1
67 years, male
103.2
466_1
57 years, female
102.9
153_1
70 years, female
102.4
246_1
77 years, male
101.3
320_1
89 years, female
101.1
243_1
75 years, male
100.9
318_1
68 years, male
100.2
376_1
75 years, female
100.0
350_1
84 years, female
99.7
99_1
64 years, male
99.0
384_1
83 years, male
99.0
425_1
59 years, female
98.6
468_1
89 years, male
98.5
480_1
63 years, male
98.1
126_1
63 years, male
96.9
293_1
68 years, female
95.8
335_1
73 years, female
95.7
307_1
66 years, female
95.6
352_1
62 years, male
94.9
295_1
61 years, female
94.6
319_1
81 years, male
94.5
264_1
73 years, female
93.7
9_1
66 years, female
93.4
292_1
71 years, male
93.1
356_1
87 years, female
88.6
406_1
79 years, male
87.6
354_1
81 years, female
87.2
517_1
88 years, male
83.2
526_1
61 years, male
82.7
499_1
55 years, female
79.3
351_1
91 years, male
76.1
495_1
57 years, female
75.7
217_1
76 years, male
74.8
317_1
60 years, male
74.1
137_1
83 years, male
72.8
349_1
83 years, male
72.8
308_1
70 years, female
66.4
394_1
75 years, female
66.4
503_1
68 years, male
66.3
218_1
71 years, female
64.8
389_1
86 years, female
50.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
