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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:446.4 nTPM
FANTOM5:703.7 Scaled Tags Per Million
Pig:200.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003482
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 446.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 446.4
Samples: 246

Max nTPM: 1157.0
Min nTPM: 218.3
Std nTPM: 132.1
Median nTPM: 437.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1157.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 812.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 797.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 793.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 787.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 748.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 726.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 725.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 720.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 711.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 693.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 691.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 683.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 677.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 666.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 666.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 665.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 659.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 647.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 643.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 642.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 640.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 637.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 627.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 625.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 619.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 611.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 610.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 597.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 594.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 593.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 593.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 590.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 590.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 589.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 587.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 585.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 578.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 577.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 567.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 550.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 547.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 545.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 543.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 541.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 540.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 539.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 538.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 537.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 534.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 531.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 527.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 526.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 526.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 525.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 524.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 524.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 523.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 521.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 519.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 517.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 516.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 515.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 514.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 512.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 512.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 507.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 506.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 504.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 499.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 499.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 497.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 496.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 496.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 495.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 494.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 493.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 491.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 491.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 490.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 489.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 486.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 485.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 482.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 482.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 482.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 479.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 479.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 479.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 478.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 477.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 476.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 476.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 475.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 474.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 473.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 472.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 471.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 469.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 468.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 466.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 466.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 462.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 460.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 460.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 458.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 456.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 455.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 455.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 452.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 452.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 450.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 449.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 447.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 447.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 446.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 444.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 442.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 440.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 438.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 438.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 437.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 437.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 437.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 435.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 434.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 432.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 429.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 429.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 428.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 426.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 426.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 420.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 419.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 419.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 418.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 415.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 414.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 409.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 408.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 408.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 407.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 407.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 406.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 406.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 404.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 404.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 404.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 402.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 401.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 400.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 400.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 399.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 397.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 397.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 397.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 391.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 389.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 388.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 381.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 379.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 379.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 377.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 377.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 374.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 373.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 372.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 371.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 367.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 367.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 364.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 361.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 360.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 359.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 358.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 358.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 358.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 358.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 354.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 354.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 354.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 353.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 352.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 351.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 349.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 349.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 347.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 346.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 343.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 343.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 342.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 341.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 340.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 340.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 340.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 338.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 337.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 335.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 334.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 331.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 330.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 323.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 321.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 321.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 320.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 319.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 319.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 312.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 311.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 310.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 309.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 309.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 306.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 305.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 305.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 304.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 302.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 299.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 298.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 296.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 293.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 293.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 289.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 285.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 285.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 284.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 281.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 281.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 279.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 278.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 276.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 273.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 273.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 268.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 264.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 258.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 252.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 248.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 244.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 235.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 232.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 231.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 227.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 227.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 220.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 218.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 703.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 703.7
FF:10164-103B2 76 years, female 703.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 200.4
Pig sample Sample description nTPM
Caudate
nTPM: 200.4
Samples: 4

Max nTPM: 232.3
Min nTPM: 177.9
Sample A Female 177.9
Sample B Female 202.9
Sample C Male 232.3
Sample D Male 188.4

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