HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.7 nTPM
HPA:62.7 nTPM
GTEx:46.6 nTPM
FANTOM5:72.6 Scaled Tags Per Million
Pig:48.9 nTPM
Mouse:34.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003228
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.7
Sample id Sample description nTPM
Hippocampus
nTPM: 60.6
2529 Female, age 94, left hemisphere 67.4
2148 Female, age 91, left hemisphere 63.3
1855 Male, age 76, left hemisphere 63.1
1911 Female, age 85, right hemisphere 61.4
1898 Male, age 80, left hemisphere 57.3
2621 Female, age 67, right hemisphere 50.7
Dentate gyrus
nTPM: 56.2
2528 Male, age 74, both hemispheres 61.6
2010 Male, age 76, both hemispheres 61.2
2530 Female, age 94, left hemisphere 59.2
2246 Female, age 85, both hemispheres 57.2
1927 Female, age 91, both hemispheres 50.4
2531 Female, age 67, both hemispheres 47.3
Entorhinal gyrus
nTPM: 59.5
2117 Female, age 91, right hemisphere 73.9
1938 Female, age 85, left hemisphere 60.0
2686 Male, age 75, right hemisphere 58.8
1787 Male, age 76, left hemisphere 58.6
2764 Male, age 80, right hemisphere 55.6
2613 Female, age 94, left hemisphere 50.0
Hippocampus, CA1
nTPM: 55.1
1873 Female, age 85, both hemispheres 63.4
2527 Male, age 74, both hemispheres 59.7
2082 Female, age 91, right hemisphere 54.0
2045 Male, age 76, both hemispheres 49.5
2749 Male, age 80, left hemisphere 48.8
Hippocampus, CA2
nTPM: 55.6
1963 Male, age 80, left hemisphere 58.5
2113 Female, age 91, right hemisphere 58.5
1940 Female, age 85, left hemisphere 58.1
2437 Female, age 94, left hemisphere 56.0
2249 Male, age 74, both hemispheres 55.6
1892 Male, age 76, both hemispheres 47.0
Hippocampus, CA3
nTPM: 52.5
2861 Female, age 67, both hemispheres 58.6
1891 Female, age 85, both hemispheres 57.6
2620 Female, age 94, left hemisphere 51.9
1867 Male, age 76, both hemispheres 50.4
2137 Male, age 80, left hemisphere 49.5
2436 Male, age 74, both hemispheres 47.1
Parahippocampal cortex
nTPM: 56.1
2692 Male, age 74, both hemispheres 63.9
2622 Female, age 67, right hemisphere 61.7
2018 Male, age 76, both hemispheres 61.0
1850 Male, age 80, both hemispheres 57.4
1933 Female, age 85, both hemispheres 55.4
2532 Female, age 72, left hemisphere 55.2
1990 Female, age 91, right hemisphere 54.3
2245 Female, age 91, both hemispheres 52.8
2250 Female, age 67, right hemisphere 51.3
2693 Female, age 94, both hemispheres 47.8
Perirhinal gyrus
nTPM: 51.2
1794 Male, age 80, right hemisphere 54.9
1847 Female, age 91, left hemisphere 53.1
1841 Female, age 85, right hemisphere 52.6
2848 Male, age 76, right hemisphere 48.0
2521 Female, age 94, right hemisphere 47.3
Subiculum
nTPM: 62.7
2438 Female, age 94, left hemisphere 70.8
2042 Male, age 76, both hemispheres 67.0
2729 Female, age 91, right hemisphere 65.3
2619 Male, age 74, both hemispheres 63.7
1901 Male, age 80, both hemispheres 55.6
1977 Female, age 85, both hemispheres 54.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.6
Samples: 197

Max nTPM: 100.3
Min nTPM: 15.4
Std nTPM: 12.7
Median nTPM: 45.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 100.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 82.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 80.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 79.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 79.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 77.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 70.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 70.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 68.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 67.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.6
FF:10153-102I9 76 years, female 93.0
FF:10169-103B7 60 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 54.5
Min nTPM: 35.0
Sample A Female 53.6
Sample B Female 45.2
Sample C Male 54.5
Sample D Male 35.0
Entorhinal cortex
nTPM: 45.9
Samples: 4

Max nTPM: 50.9
Min nTPM: 36.8
Sample A Female 47.7
Sample B Female 48.3
Sample C Male 50.9
Sample D Male 36.8
Subiculum
nTPM: 45.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 41.4
Sample A Female 51.6
Sample B Female 43.8
Sample C Male 44.6
Sample D Male 41.4
Ventral hippocampus
nTPM: 48.9
Samples: 4

Max nTPM: 65.6
Min nTPM: 38.6
Sample A Female 42.5
Sample B Female 38.6
Sample C Male 65.6
Sample D Male 48.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 29.7
Sample A Male 34.4
Sample B Male 29.7
Sample C Female 33.2
Sample D Female 33.4
Hippocampal formation
nTPM: 34.7
Samples: 4

Max nTPM: 36.6
Min nTPM: 32.7
Sample A Male 32.7
Sample B Male 35.2
Sample C Female 36.6
Sample D Female 34.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
79756317 Antisense, RP_071204_02_E06, Mouse strain C57BL/6J (56 days, male) 0.9

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