HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:66.0 nTPM
HPA:66.0 nTPM
GTEx:55.9 nTPM
FANTOM5:109.6 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:19.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.0
Sample id Sample description nTPM
Hippocampus
nTPM: 58.0
1911 Female, age 85, right hemisphere 68.0
2529 Female, age 94, left hemisphere 61.6
2621 Female, age 67, right hemisphere 57.8
1855 Male, age 76, left hemisphere 54.7
2148 Female, age 91, left hemisphere 54.2
1898 Male, age 80, left hemisphere 52.0
Dentate gyrus
nTPM: 56.6
2530 Female, age 94, left hemisphere 64.1
2010 Male, age 76, both hemispheres 60.6
2528 Male, age 74, both hemispheres 58.0
2246 Female, age 85, both hemispheres 56.7
2531 Female, age 67, both hemispheres 50.5
1927 Female, age 91, both hemispheres 50.1
Entorhinal gyrus
nTPM: 56.0
2117 Female, age 91, right hemisphere 67.8
2686 Male, age 75, right hemisphere 56.8
2764 Male, age 80, right hemisphere 56.4
1938 Female, age 85, left hemisphere 53.9
1787 Male, age 76, left hemisphere 53.2
2613 Female, age 94, left hemisphere 48.1
Hippocampus, CA1
nTPM: 53.9
1873 Female, age 85, both hemispheres 57.7
2082 Female, age 91, right hemisphere 56.7
2527 Male, age 74, both hemispheres 56.4
2045 Male, age 76, both hemispheres 52.8
2749 Male, age 80, left hemisphere 45.9
Hippocampus, CA2
nTPM: 57.8
1963 Male, age 80, left hemisphere 63.0
2249 Male, age 74, both hemispheres 59.8
2113 Female, age 91, right hemisphere 57.8
2437 Female, age 94, left hemisphere 57.4
1940 Female, age 85, left hemisphere 56.7
1892 Male, age 76, both hemispheres 52.0
Hippocampus, CA3
nTPM: 54.6
1891 Female, age 85, both hemispheres 71.8
1867 Male, age 76, both hemispheres 58.1
2436 Male, age 74, both hemispheres 55.4
2620 Female, age 94, left hemisphere 49.2
2861 Female, age 67, both hemispheres 48.3
2137 Male, age 80, left hemisphere 45.0
Parahippocampal cortex
nTPM: 56.1
2018 Male, age 76, both hemispheres 65.2
2692 Male, age 74, both hemispheres 64.6
2532 Female, age 72, left hemisphere 64.2
1990 Female, age 91, right hemisphere 59.0
1933 Female, age 85, both hemispheres 53.8
1850 Male, age 80, both hemispheres 53.4
2693 Female, age 94, both hemispheres 52.8
2245 Female, age 91, both hemispheres 52.0
2622 Female, age 67, right hemisphere 49.1
2250 Female, age 67, right hemisphere 46.5
Perirhinal gyrus
nTPM: 48.0
2521 Female, age 94, right hemisphere 51.5
2848 Male, age 76, right hemisphere 48.5
1794 Male, age 80, right hemisphere 47.7
1841 Female, age 85, right hemisphere 47.4
1847 Female, age 91, left hemisphere 44.8
Subiculum
nTPM: 66.0
2042 Male, age 76, both hemispheres 77.3
1901 Male, age 80, both hemispheres 70.3
2438 Female, age 94, left hemisphere 65.9
2619 Male, age 74, both hemispheres 64.6
1977 Female, age 85, both hemispheres 63.8
2729 Female, age 91, right hemisphere 54.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.9
Samples: 197

Max nTPM: 161.1
Min nTPM: 14.8
Std nTPM: 29.2
Median nTPM: 48.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 161.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 154.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 148.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 132.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 127.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 124.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 122.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 120.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 116.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 115.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 114.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.6
FF:10153-102I9 76 years, female 135.6
FF:10169-103B7 60 years, female 83.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 45.0
Min nTPM: 20.9
Sample A Female 45.0
Sample B Female 24.4
Sample C Male 43.4
Sample D Male 20.9
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 29.5
Min nTPM: 22.5
Sample A Female 28.2
Sample B Female 26.5
Sample C Male 29.5
Sample D Male 22.5
Subiculum
nTPM: 30.1
Samples: 4

Max nTPM: 33.1
Min nTPM: 26.8
Sample A Female 33.1
Sample B Female 26.8
Sample C Male 29.6
Sample D Male 30.8
Ventral hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 39.5
Min nTPM: 24.8
Sample A Female 39.5
Sample B Female 24.8
Sample C Male 30.2
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.0
Sample A Male 22.6
Sample B Male 17.9
Sample C Female 17.4
Sample D Female 17.0
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 16.4
Sample A Male 19.0
Sample B Male 16.4
Sample C Female 19.9
Sample D Female 20.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
73712762 Antisense, RP_051206_02_C11, Mouse strain C57BL/6J (56 days, male) 0.5

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