HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:89.8 nTPM
HPA:89.8 nTPM
GTEx:84.3 nTPM
FANTOM5:114.2 Scaled Tags Per Million
Mouse:90.4 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB040539
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.8
Sample id Sample description nTPM
Hippocampus
nTPM: 80.9
1898 Male, age 80, left hemisphere 87.4
2621 Female, age 67, right hemisphere 82.1
2529 Female, age 94, left hemisphere 80.9
2148 Female, age 91, left hemisphere 80.3
1855 Male, age 76, left hemisphere 79.7
1911 Female, age 85, right hemisphere 74.9
Dentate gyrus
nTPM: 81.5
2530 Female, age 94, left hemisphere 94.5
1927 Female, age 91, both hemispheres 82.1
2531 Female, age 67, both hemispheres 82.0
2010 Male, age 76, both hemispheres 81.6
2246 Female, age 85, both hemispheres 75.1
2528 Male, age 74, both hemispheres 73.8
Entorhinal gyrus
nTPM: 89.8
2686 Male, age 75, right hemisphere 99.2
2764 Male, age 80, right hemisphere 94.5
2613 Female, age 94, left hemisphere 89.3
1787 Male, age 76, left hemisphere 86.2
2117 Female, age 91, right hemisphere 85.2
1938 Female, age 85, left hemisphere 84.5
Hippocampus, CA1
nTPM: 77.7
2749 Male, age 80, left hemisphere 84.5
1873 Female, age 85, both hemispheres 78.3
2082 Female, age 91, right hemisphere 77.7
2045 Male, age 76, both hemispheres 75.4
2527 Male, age 74, both hemispheres 72.4
Hippocampus, CA2
nTPM: 82.5
1963 Male, age 80, left hemisphere 92.1
1892 Male, age 76, both hemispheres 89.6
2437 Female, age 94, left hemisphere 85.7
2113 Female, age 91, right hemisphere 78.9
1940 Female, age 85, left hemisphere 76.5
2249 Male, age 74, both hemispheres 71.9
Hippocampus, CA3
nTPM: 78.3
2861 Female, age 67, both hemispheres 88.2
1867 Male, age 76, both hemispheres 81.5
1891 Female, age 85, both hemispheres 80.9
2137 Male, age 80, left hemisphere 79.6
2620 Female, age 94, left hemisphere 74.3
2436 Male, age 74, both hemispheres 65.3
Parahippocampal cortex
nTPM: 84.9
1850 Male, age 80, both hemispheres 92.6
2532 Female, age 72, left hemisphere 89.2
1990 Female, age 91, right hemisphere 88.6
2622 Female, age 67, right hemisphere 88.0
2692 Male, age 74, both hemispheres 85.9
1933 Female, age 85, both hemispheres 85.3
2693 Female, age 94, both hemispheres 82.4
2245 Female, age 91, both hemispheres 81.8
2018 Male, age 76, both hemispheres 78.7
2250 Female, age 67, right hemisphere 76.5
Perirhinal gyrus
nTPM: 89.0
1794 Male, age 80, right hemisphere 94.6
2848 Male, age 76, right hemisphere 90.8
1847 Female, age 91, left hemisphere 89.9
1841 Female, age 85, right hemisphere 88.0
2521 Female, age 94, right hemisphere 81.7
Subiculum
nTPM: 81.9
2438 Female, age 94, left hemisphere 90.1
1901 Male, age 80, both hemispheres 84.5
1977 Female, age 85, both hemispheres 83.7
2729 Female, age 91, right hemisphere 79.0
2042 Male, age 76, both hemispheres 77.3
2619 Male, age 74, both hemispheres 76.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 84.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.3
Samples: 197

Max nTPM: 214.7
Min nTPM: 27.4
Std nTPM: 25.7
Median nTPM: 78.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 214.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 172.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 159.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 142.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 141.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 139.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 138.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 136.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 135.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 135.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 133.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.2
FF:10153-102I9 76 years, female 116.6
FF:10169-103B7 60 years, female 111.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.4
Samples: 4

Max nTPM: 92.3
Min nTPM: 89.0
Sample A Male 89.2
Sample B Male 92.3
Sample C Female 89.0
Sample D Female 91.1
Hippocampal formation
nTPM: 74.2
Samples: 4

Max nTPM: 80.8
Min nTPM: 70.8
Sample A Male 80.8
Sample B Male 72.5
Sample C Female 70.8
Sample D Female 72.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
67765710 Antisense, RP_040916_01_E03, Mouse strain C57BL/6J (56 days, male) 10.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.