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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:230.6 nTPM
FANTOM5:188.1 Scaled Tags Per Million
Pig:68.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB004082
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 230.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 230.6
Samples: 246

Max nTPM: 632.4
Min nTPM: 102.6
Std nTPM: 70.5
Median nTPM: 221.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 632.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 489.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 457.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 446.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 426.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 408.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 405.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 400.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 395.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 384.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 375.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 360.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 359.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 359.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 354.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 352.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 345.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 340.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 337.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 326.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 326.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 324.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 312.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 312.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 311.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 311.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 310.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 308.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 308.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 303.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 303.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 301.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 299.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 299.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 291.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 288.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 288.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 286.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 284.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 283.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 283.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 279.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 276.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 276.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 276.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 276.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 275.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 274.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 274.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 272.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 271.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 271.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 269.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 269.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 265.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 264.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 264.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 263.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 262.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 261.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 261.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 261.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 260.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 259.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 259.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 258.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 256.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 255.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 255.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 254.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 253.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 253.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 253.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 252.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 252.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 250.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 250.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 250.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 249.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 246.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 244.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 244.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 243.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 243.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 242.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 242.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 241.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 240.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 239.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 239.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 238.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 238.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 237.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 237.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 236.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 236.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 236.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 236.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 236.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 234.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 234.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 234.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 233.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 232.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 232.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 231.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 231.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 230.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 229.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 229.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 228.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 228.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 227.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 226.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 225.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 225.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 224.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 224.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 224.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 224.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 223.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 222.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 222.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 221.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 219.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 219.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 219.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 218.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 218.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 216.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 214.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 213.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 213.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 213.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 212.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 212.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 212.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 212.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 211.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 211.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 211.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 211.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 210.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 210.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 210.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 209.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 208.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 207.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 206.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 206.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 206.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 206.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 206.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 205.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 201.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 201.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 201.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 200.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 200.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 200.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 199.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 198.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 198.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 197.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 196.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 195.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 195.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 194.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 194.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 194.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 193.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 191.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 191.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 191.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 191.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 190.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 189.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 189.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 188.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 188.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 188.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 188.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 186.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 185.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 185.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 184.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 183.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 182.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 182.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 182.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 181.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 181.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 178.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 178.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 177.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 177.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 177.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 177.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 175.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 175.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 175.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 174.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 173.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 172.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 171.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 171.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 169.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 168.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 168.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 168.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 167.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 167.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 166.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 165.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 164.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 162.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 162.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 160.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 158.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 157.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 156.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 154.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 154.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 150.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 148.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 148.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 147.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 146.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 146.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 142.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 141.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 137.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 134.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 133.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 133.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 132.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 132.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 127.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 123.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 118.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 117.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 113.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 113.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 188.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 188.1
FF:10164-103B2 76 years, female 188.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 68.4
Pig sample Sample description nTPM
Caudate
nTPM: 68.4
Samples: 4

Max nTPM: 78.2
Min nTPM: 59.9
Sample A Female 64.2
Sample B Female 71.2
Sample C Male 78.2
Sample D Male 59.9

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