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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:164.9 nTPM
FANTOM5:111.9 Scaled Tags Per Million
Pig:46.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA028882
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 164.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 164.9
Samples: 246

Max nTPM: 407.3
Min nTPM: 79.2
Std nTPM: 43.3
Median nTPM: 157.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 407.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 360.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 292.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 288.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 286.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 263.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 258.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 254.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 246.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 244.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 242.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 240.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 239.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 238.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 238.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 237.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 234.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 232.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 226.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 225.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 225.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 223.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 222.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 220.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 220.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 219.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 217.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 217.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 215.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 214.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 213.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 208.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 208.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 207.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 205.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 204.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 203.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 203.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 200.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 199.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 198.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 198.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 196.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 195.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 195.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 194.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 194.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 194.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 193.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 193.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 192.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 191.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 190.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 189.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 189.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 188.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 188.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 187.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 187.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 186.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 186.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 186.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 186.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 185.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 185.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 185.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 184.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 183.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 183.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 182.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 181.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 180.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 180.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 180.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 180.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 179.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 179.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 179.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 178.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 178.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 177.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 177.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 177.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 176.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 176.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 175.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 175.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 174.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 172.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 172.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 172.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 171.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 171.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 170.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 170.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 170.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 169.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 169.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 168.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 167.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 167.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 167.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 166.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 165.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 164.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 164.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 164.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 164.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 163.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 163.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 162.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 162.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 161.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 161.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 161.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 161.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 160.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 159.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 159.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 158.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 157.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 157.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 156.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 156.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 155.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 154.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 154.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 154.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 154.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 154.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 153.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 153.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 153.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 153.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 153.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 153.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 152.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 152.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 152.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 152.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 152.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 152.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 152.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 151.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 151.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 150.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 149.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 149.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 147.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 147.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 146.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 146.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 146.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 146.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 146.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 144.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 144.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 144.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 144.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 143.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 143.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 142.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 142.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 142.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 141.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 141.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 140.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 139.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 138.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 138.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 138.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 138.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 137.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 137.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 136.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 136.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 135.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 135.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 135.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 133.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 133.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 133.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 133.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 131.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 130.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 130.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 130.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 130.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 130.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 129.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 129.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 129.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 129.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 129.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 128.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 128.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 126.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 126.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 125.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 125.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 125.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 125.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 124.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 123.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 122.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 122.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 122.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 121.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 121.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 121.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 120.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 119.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 119.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 119.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 117.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 117.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 116.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 116.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 116.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 116.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 116.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 115.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 113.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 113.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 113.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 111.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 110.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 109.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 109.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 108.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 108.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 107.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 107.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 106.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 104.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 103.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 97.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 79.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 111.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 111.9
FF:10164-103B2 76 years, female 111.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 46.8
Pig sample Sample description nTPM
Caudate
nTPM: 46.8
Samples: 4

Max nTPM: 51.3
Min nTPM: 41.5
Sample A Female 41.5
Sample B Female 51.3
Sample C Male 43.8
Sample D Male 50.6

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