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PHF10
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:34.6 nTPM
FANTOM5:25.0 Scaled Tags Per Million
Pig:10.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055649
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 34.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 34.6
Samples: 246

Max nTPM: 70.8
Min nTPM: 13.3
Std nTPM: 9.1
Median nTPM: 33.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 70.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 68.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 61.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 60.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 53.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 50.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 50.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 49.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 49.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 47.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 47.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 46.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 46.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 46.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 46.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 46.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 45.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 45.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 44.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 44.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 44.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 43.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 43.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 43.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 43.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 43.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 43.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 42.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 42.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 42.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 42.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 41.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 41.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 40.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 40.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 40.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 40.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 40.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 40.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 39.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 39.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 39.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 39.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 38.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 38.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 38.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 38.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 38.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 38.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 38.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 38.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 38.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 37.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 37.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 37.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 37.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 36.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 36.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 36.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 36.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 36.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 36.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 36.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 36.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 35.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 35.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 35.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 35.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 35.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 35.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 35.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 34.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 34.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 34.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 34.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 34.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 34.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 34.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 33.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 33.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 33.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 33.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 33.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 33.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 33.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 33.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 33.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 33.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 32.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 32.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 32.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 32.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 31.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 31.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 31.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 31.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 31.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 31.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 31.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 31.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 31.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 31.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 31.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 31.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 30.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 30.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 30.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 30.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 30.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 30.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 30.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 30.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 30.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 30.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 30.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 30.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 30.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 30.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 29.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 29.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 29.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 29.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 29.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 29.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 29.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 29.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 29.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 29.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 28.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 28.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 28.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 28.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 28.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 28.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 28.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 28.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 28.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 27.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 27.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 27.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 27.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 27.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 27.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 27.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 27.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 27.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 27.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 27.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 27.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 27.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 26.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 26.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 26.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 26.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 26.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 25.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 25.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 25.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 25.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 25.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 25.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 25.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 25.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 25.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 25.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 24.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 24.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 24.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 24.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 24.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 24.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 24.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 24.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 23.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 23.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 23.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 23.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 23.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 23.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 22.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 22.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 22.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 22.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 21.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 21.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 20.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 20.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 18.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 17.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 16.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 13.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 25.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.0
FF:10164-103B2 76 years, female 25.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.4
Pig sample Sample description nTPM
Caudate
nTPM: 10.4
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 10.0
Sample C Male 10.9
Sample D Male 10.8

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