HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:32.0 nTPM
HPA:32.0 nTPM
GTEx:26.1 nTPM
FANTOM5:15.0 Scaled Tags Per Million
Pig:23.7 nTPM
Mouse:19.8 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.0
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
2529 Female, age 94, left hemisphere 33.7
2148 Female, age 91, left hemisphere 31.5
1911 Female, age 85, right hemisphere 30.5
1898 Male, age 80, left hemisphere 28.2
2621 Female, age 67, right hemisphere 28.2
1855 Male, age 76, left hemisphere 26.4
Dentate gyrus
nTPM: 29.8
2528 Male, age 74, both hemispheres 33.0
2530 Female, age 94, left hemisphere 32.8
2246 Female, age 85, both hemispheres 30.7
2531 Female, age 67, both hemispheres 28.1
2010 Male, age 76, both hemispheres 27.4
1927 Female, age 91, both hemispheres 26.5
Entorhinal gyrus
nTPM: 31.5
2117 Female, age 91, right hemisphere 37.6
2764 Male, age 80, right hemisphere 32.7
2686 Male, age 75, right hemisphere 30.8
2613 Female, age 94, left hemisphere 30.4
1938 Female, age 85, left hemisphere 29.9
1787 Male, age 76, left hemisphere 27.6
Hippocampus, CA1
nTPM: 27.3
2082 Female, age 91, right hemisphere 31.1
2527 Male, age 74, both hemispheres 31.0
1873 Female, age 85, both hemispheres 28.4
2749 Male, age 80, left hemisphere 23.8
2045 Male, age 76, both hemispheres 22.1
Hippocampus, CA2
nTPM: 29.7
2113 Female, age 91, right hemisphere 32.5
2249 Male, age 74, both hemispheres 32.0
2437 Female, age 94, left hemisphere 31.4
1940 Female, age 85, left hemisphere 29.7
1963 Male, age 80, left hemisphere 29.6
1892 Male, age 76, both hemispheres 23.1
Hippocampus, CA3
nTPM: 29.1
2436 Male, age 74, both hemispheres 38.8
1891 Female, age 85, both hemispheres 29.8
2861 Female, age 67, both hemispheres 28.3
2620 Female, age 94, left hemisphere 28.0
1867 Male, age 76, both hemispheres 25.3
2137 Male, age 80, left hemisphere 24.0
Parahippocampal cortex
nTPM: 29.3
2692 Male, age 74, both hemispheres 35.7
2622 Female, age 67, right hemisphere 31.0
1990 Female, age 91, right hemisphere 30.6
2532 Female, age 72, left hemisphere 30.0
1933 Female, age 85, both hemispheres 29.0
2245 Female, age 91, both hemispheres 29.0
2250 Female, age 67, right hemisphere 28.1
2018 Male, age 76, both hemispheres 27.0
2693 Female, age 94, both hemispheres 26.6
1850 Male, age 80, both hemispheres 26.3
Perirhinal gyrus
nTPM: 26.3
2521 Female, age 94, right hemisphere 27.0
1794 Male, age 80, right hemisphere 26.8
1847 Female, age 91, left hemisphere 26.4
2848 Male, age 76, right hemisphere 25.7
1841 Female, age 85, right hemisphere 25.6
Subiculum
nTPM: 32.0
2042 Male, age 76, both hemispheres 35.7
2619 Male, age 74, both hemispheres 34.7
2729 Female, age 91, right hemisphere 32.1
1901 Male, age 80, both hemispheres 30.1
1977 Female, age 85, both hemispheres 29.9
2438 Female, age 94, left hemisphere 29.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.1
Samples: 197

Max nTPM: 53.4
Min nTPM: 11.6
Std nTPM: 7.3
Median nTPM: 25.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 53.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 49.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 47.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 44.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 43.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 41.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 41.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 41.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 40.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 40.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 39.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.0
FF:10153-102I9 76 years, female 15.3
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 16.0
Sample A Female 25.5
Sample B Female 21.7
Sample C Male 25.3
Sample D Male 16.0
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 25.3
Min nTPM: 19.4
Sample A Female 20.4
Sample B Female 21.5
Sample C Male 25.3
Sample D Male 19.4
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 19.4
Sample A Female 22.8
Sample B Female 23.2
Sample C Male 22.8
Sample D Male 19.4
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 31.7
Min nTPM: 18.7
Sample A Female 20.8
Sample B Female 18.7
Sample C Male 31.7
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.6
Sample A Male 20.9
Sample B Male 22.1
Sample C Female 20.5
Sample D Female 15.6
Hippocampal formation
nTPM: 19.4
Samples: 4

Max nTPM: 22.8
Min nTPM: 17.2
Sample A Male 18.1
Sample B Male 19.5
Sample C Female 17.2
Sample D Female 22.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
68203441 Antisense, RP_041018_01_B10, Mouse strain C57BL/6J (56 days, male) 11.0
75651228 Antisense, RP_060518_01_D06, Mouse strain C57BL/6J (56 days, male) 9.1

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