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ATP5IF1
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  • ATP5IF1
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:93.7 nTPM
HPA:93.7 nTPM
GTEx:221.8 nTPM
FANTOM5:350.8 Scaled Tags Per Million
Pig:190.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 93.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 91.4
2194 Female, age 79, both hemispheres 96.4
1981 Female, age 72, midline 92.8
2048 Male, age 55, midline 89.5
2816 Male, age 47, midline 89.3
2565 Male, age 75, midline 89.1
Cervical spinal cord, dorsal horn
nTPM: 93.7
2721 Male, age 90, both hemispheres 95.5
2173 Female, age 72, unknown 95.1
2069 Male, age 47, both hemispheres 94.2
1877 Male, age 55, unknown 92.9
2296 Male, age 66, both hemispheres 92.5
2297 Male, age 75, both hemispheres 92.2
Cervical spinal cord, ventral horn
nTPM: 90.9
2068 Male, age 55, unknown 96.8
2820 Female, age 79, both hemispheres 92.1
2480 Male, age 75, both hemispheres 90.4
2295 Male, age 66, both hemispheres 89.9
2098 Female, age 72, unknown 88.1
2809 Male, age 90, both hemispheres 87.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 221.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 221.8
Samples: 159

Max nTPM: 451.9
Min nTPM: 120.4
Std nTPM: 56.0
Median nTPM: 213.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 451.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 399.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 361.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 356.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 345.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 342.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 334.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 332.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 319.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 316.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 313.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 313.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 313.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 312.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 307.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 306.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 289.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 288.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 283.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 281.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 280.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 277.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 277.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 275.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 274.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 273.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 272.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 268.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 267.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 266.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 265.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 260.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 257.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 256.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 256.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 255.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 255.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 252.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 251.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 249.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 249.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 248.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 247.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 246.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 246.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 245.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 245.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 244.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 244.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 243.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 243.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 242.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 242.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 240.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 240.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 239.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 237.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 235.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 231.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 231.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 231.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 231.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 231.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 230.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 229.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 228.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 226.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 222.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 221.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 221.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 219.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 219.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 219.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 216.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 216.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 215.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 214.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 214.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 214.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 213.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 212.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 212.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 210.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 209.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 208.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 208.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 207.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 207.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 207.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 205.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 205.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 205.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 205.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 204.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 203.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 203.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 203.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 202.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 197.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 196.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 196.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 196.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 195.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 195.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 194.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 193.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 192.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 192.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 191.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 191.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 189.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 189.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 189.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 188.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 188.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 186.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 185.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 184.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 184.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 183.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 183.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 180.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 180.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 179.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 178.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 177.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 176.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 176.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 175.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 175.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 173.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 171.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 171.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 169.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 168.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 168.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 167.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 165.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 165.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 163.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 159.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 157.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 156.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 156.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 156.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 155.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 152.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 152.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 151.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 149.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 144.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 138.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 135.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 135.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 131.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 130.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 129.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 122.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 120.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 350.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 350.8
FF:10181-103D1 60 years, female 488.7
FF:10159-103A6 76 years, female 213.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 190.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 150.4
Samples: 4

Max nTPM: 167.4
Min nTPM: 137.4
Sample A Female 154.9
Sample B Female 137.4
Sample C Male 167.4
Sample D Male 142.0
Ventral spinal cord
nTPM: 190.0
Samples: 4

Max nTPM: 233.1
Min nTPM: 148.0
Sample A Female 148.0
Sample B Female 210.1
Sample C Male 233.1
Sample D Male 168.6

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