HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.0 nTPM
HPA:68.0 nTPM
GTEx:76.6 nTPM
FANTOM5:76.1 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:17.2 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038135Antibody HPA038136Antibody CAB017187
Glial cells MediumMediumMedium
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.0
Sample id Sample description nTPM
Hippocampus
nTPM: 61.9
2529 Female, age 94, left hemisphere 70.5
1911 Female, age 85, right hemisphere 64.7
1855 Male, age 76, left hemisphere 63.4
2148 Female, age 91, left hemisphere 61.9
1898 Male, age 80, left hemisphere 57.5
2621 Female, age 67, right hemisphere 53.1
Dentate gyrus
nTPM: 61.8
2528 Male, age 74, both hemispheres 72.0
2530 Female, age 94, left hemisphere 69.6
2010 Male, age 76, both hemispheres 69.3
2246 Female, age 85, both hemispheres 57.8
2531 Female, age 67, both hemispheres 51.4
1927 Female, age 91, both hemispheres 50.8
Entorhinal gyrus
nTPM: 63.3
2764 Male, age 80, right hemisphere 68.3
2117 Female, age 91, right hemisphere 67.1
2613 Female, age 94, left hemisphere 67.1
2686 Male, age 75, right hemisphere 62.9
1787 Male, age 76, left hemisphere 59.1
1938 Female, age 85, left hemisphere 55.1
Hippocampus, CA1
nTPM: 60.4
2527 Male, age 74, both hemispheres 66.6
2082 Female, age 91, right hemisphere 64.7
1873 Female, age 85, both hemispheres 59.4
2045 Male, age 76, both hemispheres 56.5
2749 Male, age 80, left hemisphere 55.0
Hippocampus, CA2
nTPM: 60.6
2437 Female, age 94, left hemisphere 70.1
1963 Male, age 80, left hemisphere 64.9
2249 Male, age 74, both hemispheres 63.2
2113 Female, age 91, right hemisphere 62.4
1892 Male, age 76, both hemispheres 51.9
1940 Female, age 85, left hemisphere 51.1
Hippocampus, CA3
nTPM: 56.5
1891 Female, age 85, both hemispheres 64.5
2861 Female, age 67, both hemispheres 57.9
1867 Male, age 76, both hemispheres 56.9
2436 Male, age 74, both hemispheres 54.4
2137 Male, age 80, left hemisphere 53.3
2620 Female, age 94, left hemisphere 52.2
Parahippocampal cortex
nTPM: 57.8
2692 Male, age 74, both hemispheres 74.2
2018 Male, age 76, both hemispheres 64.6
1990 Female, age 91, right hemisphere 58.2
2622 Female, age 67, right hemisphere 57.2
2532 Female, age 72, left hemisphere 56.5
1933 Female, age 85, both hemispheres 56.2
2245 Female, age 91, both hemispheres 55.1
2693 Female, age 94, both hemispheres 53.4
1850 Male, age 80, both hemispheres 52.3
2250 Female, age 67, right hemisphere 50.0
Perirhinal gyrus
nTPM: 48.7
2521 Female, age 94, right hemisphere 51.7
2848 Male, age 76, right hemisphere 50.9
1847 Female, age 91, left hemisphere 49.0
1794 Male, age 80, right hemisphere 48.3
1841 Female, age 85, right hemisphere 43.9
Subiculum
nTPM: 68.0
2042 Male, age 76, both hemispheres 74.7
2619 Male, age 74, both hemispheres 73.1
2438 Female, age 94, left hemisphere 67.7
1901 Male, age 80, both hemispheres 66.3
2729 Female, age 91, right hemisphere 65.0
1977 Female, age 85, both hemispheres 61.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.6
Samples: 197

Max nTPM: 208.3
Min nTPM: 19.1
Std nTPM: 28.7
Median nTPM: 70.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 208.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 203.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 162.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 142.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 136.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 135.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 131.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 131.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 130.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 129.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 126.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.1
FF:10153-102I9 76 years, female 89.4
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 19.1
Min nTPM: 7.8
Sample A Female 14.9
Sample B Female 8.2
Sample C Male 19.1
Sample D Male 7.8
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 9.2
Sample A Female 9.4
Sample B Female 10.4
Sample C Male 9.4
Sample D Male 9.2
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.8
Sample A Female 10.4
Sample B Female 8.8
Sample C Male 9.6
Sample D Male 9.6
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 16.1
Min nTPM: 7.2
Sample A Female 10.5
Sample B Female 7.2
Sample C Male 16.1
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.9
Sample A Male 17.1
Sample B Male 19.5
Sample C Female 14.9
Sample D Female 17.5
Hippocampal formation
nTPM: 12.1
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.4
Sample A Male 11.9
Sample B Male 11.7
Sample C Female 11.4
Sample D Female 13.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
69735018 Antisense, RP_050503_01_H06, Mouse strain C57BL/6J (56 days, male) 4.4

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