HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:76.8 nTPM
HPA:76.8 nTPM
GTEx:85.3 nTPM
FANTOM5:156.5 Scaled Tags Per Million
Mouse:42.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.8
Sample id Sample description nTPM
Hippocampus
nTPM: 68.5
2621 Female, age 67, right hemisphere 77.1
1898 Male, age 80, left hemisphere 72.1
2148 Female, age 91, left hemisphere 70.0
1911 Female, age 85, right hemisphere 68.2
2529 Female, age 94, left hemisphere 66.6
1855 Male, age 76, left hemisphere 57.0
Dentate gyrus
nTPM: 69.6
2528 Male, age 74, both hemispheres 78.8
2530 Female, age 94, left hemisphere 77.8
2531 Female, age 67, both hemispheres 75.2
2010 Male, age 76, both hemispheres 69.0
1927 Female, age 91, both hemispheres 59.0
2246 Female, age 85, both hemispheres 57.8
Entorhinal gyrus
nTPM: 69.0
2117 Female, age 91, right hemisphere 83.5
2613 Female, age 94, left hemisphere 74.6
2686 Male, age 75, right hemisphere 72.0
2764 Male, age 80, right hemisphere 71.0
1938 Female, age 85, left hemisphere 57.3
1787 Male, age 76, left hemisphere 55.8
Hippocampus, CA1
nTPM: 64.9
2749 Male, age 80, left hemisphere 71.5
2527 Male, age 74, both hemispheres 69.3
1873 Female, age 85, both hemispheres 67.1
2082 Female, age 91, right hemisphere 66.1
2045 Male, age 76, both hemispheres 50.7
Hippocampus, CA2
nTPM: 68.3
1963 Male, age 80, left hemisphere 92.8
2437 Female, age 94, left hemisphere 70.0
2113 Female, age 91, right hemisphere 66.9
2249 Male, age 74, both hemispheres 66.2
1892 Male, age 76, both hemispheres 58.4
1940 Female, age 85, left hemisphere 55.6
Hippocampus, CA3
nTPM: 72.0
2861 Female, age 67, both hemispheres 94.9
2620 Female, age 94, left hemisphere 75.5
1891 Female, age 85, both hemispheres 75.4
2137 Male, age 80, left hemisphere 65.0
1867 Male, age 76, both hemispheres 60.8
2436 Male, age 74, both hemispheres 60.6
Parahippocampal cortex
nTPM: 59.4
2692 Male, age 74, both hemispheres 67.5
1990 Female, age 91, right hemisphere 63.0
2532 Female, age 72, left hemisphere 61.2
2693 Female, age 94, both hemispheres 60.9
2622 Female, age 67, right hemisphere 60.4
2018 Male, age 76, both hemispheres 59.4
2250 Female, age 67, right hemisphere 56.2
2245 Female, age 91, both hemispheres 56.1
1850 Male, age 80, both hemispheres 55.3
1933 Female, age 85, both hemispheres 54.1
Perirhinal gyrus
nTPM: 52.6
2521 Female, age 94, right hemisphere 62.6
1794 Male, age 80, right hemisphere 53.0
1847 Female, age 91, left hemisphere 51.0
1841 Female, age 85, right hemisphere 48.3
2848 Male, age 76, right hemisphere 48.2
Subiculum
nTPM: 76.8
2042 Male, age 76, both hemispheres 94.8
1901 Male, age 80, both hemispheres 77.2
2438 Female, age 94, left hemisphere 76.7
1977 Female, age 85, both hemispheres 71.0
2729 Female, age 91, right hemisphere 70.8
2619 Male, age 74, both hemispheres 70.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.3
Samples: 197

Max nTPM: 220.6
Min nTPM: 34.9
Std nTPM: 24.5
Median nTPM: 79.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 220.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 214.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 163.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 148.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 145.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 141.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 141.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 133.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 132.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 130.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 125.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 156.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 156.5
FF:10153-102I9 76 years, female 211.5
FF:10169-103B7 60 years, female 101.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.2
Samples: 4

Max nTPM: 43.6
Min nTPM: 39.4
Sample A Male 42.5
Sample B Male 43.6
Sample C Female 43.4
Sample D Female 39.4
Hippocampal formation
nTPM: 40.3
Samples: 4

Max nTPM: 44.0
Min nTPM: 36.2
Sample A Male 36.2
Sample B Male 37.4
Sample C Female 44.0
Sample D Female 43.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69874030 Antisense, RP_050512_02_E06, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

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