HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:39.8 nTPM
FANTOM5:23.0 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:5.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
2529 Female, age 94, left hemisphere 16.3
1855 Male, age 76, left hemisphere 14.9
2621 Female, age 67, right hemisphere 14.5
1898 Male, age 80, left hemisphere 12.3
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 10.1
Dentate gyrus
nTPM: 10.4
2530 Female, age 94, left hemisphere 15.1
2010 Male, age 76, both hemispheres 10.7
2528 Male, age 74, both hemispheres 10.6
2531 Female, age 67, both hemispheres 10.2
2246 Female, age 85, both hemispheres 8.7
1927 Female, age 91, both hemispheres 7.2
Entorhinal gyrus
nTPM: 15.5
2686 Male, age 75, right hemisphere 20.2
1787 Male, age 76, left hemisphere 18.2
2117 Female, age 91, right hemisphere 16.7
2764 Male, age 80, right hemisphere 14.6
2613 Female, age 94, left hemisphere 12.3
1938 Female, age 85, left hemisphere 10.8
Hippocampus, CA1
nTPM: 9.9
2045 Male, age 76, both hemispheres 11.7
2082 Female, age 91, right hemisphere 11.2
2527 Male, age 74, both hemispheres 10.7
1873 Female, age 85, both hemispheres 9.8
2749 Male, age 80, left hemisphere 6.1
Hippocampus, CA2
nTPM: 11.9
2437 Female, age 94, left hemisphere 17.6
2249 Male, age 74, both hemispheres 13.9
1892 Male, age 76, both hemispheres 12.0
2113 Female, age 91, right hemisphere 11.4
1963 Male, age 80, left hemisphere 8.3
1940 Female, age 85, left hemisphere 8.1
Hippocampus, CA3
nTPM: 9.4
2861 Female, age 67, both hemispheres 13.7
1867 Male, age 76, both hemispheres 12.5
2436 Male, age 74, both hemispheres 9.0
1891 Female, age 85, both hemispheres 8.6
2620 Female, age 94, left hemisphere 7.2
2137 Male, age 80, left hemisphere 5.0
Parahippocampal cortex
nTPM: 13.5
2622 Female, age 67, right hemisphere 18.1
2250 Female, age 67, right hemisphere 16.9
2018 Male, age 76, both hemispheres 16.1
2692 Male, age 74, both hemispheres 13.8
2245 Female, age 91, both hemispheres 13.4
1933 Female, age 85, both hemispheres 12.7
1990 Female, age 91, right hemisphere 12.1
2532 Female, age 72, left hemisphere 11.4
2693 Female, age 94, both hemispheres 10.1
1850 Male, age 80, both hemispheres 9.8
Perirhinal gyrus
nTPM: 12.7
2848 Male, age 76, right hemisphere 17.8
2521 Female, age 94, right hemisphere 12.6
1794 Male, age 80, right hemisphere 12.4
1847 Female, age 91, left hemisphere 11.2
1841 Female, age 85, right hemisphere 9.3
Subiculum
nTPM: 13.0
2729 Female, age 91, right hemisphere 15.1
2619 Male, age 74, both hemispheres 14.7
2042 Male, age 76, both hemispheres 14.5
2438 Female, age 94, left hemisphere 11.9
1901 Male, age 80, both hemispheres 11.3
1977 Female, age 85, both hemispheres 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 115.0
Min nTPM: 6.5
Std nTPM: 19.0
Median nTPM: 37.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 115.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 110.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 100.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 97.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 87.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 86.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 83.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 80.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 78.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 76.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 75.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.0
FF:10153-102I9 76 years, female 27.1
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 41.7
Min nTPM: 19.6
Sample A Female 23.6
Sample B Female 23.3
Sample C Male 41.7
Sample D Male 19.6
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 38.3
Min nTPM: 18.9
Sample A Female 36.5
Sample B Female 29.0
Sample C Male 38.3
Sample D Male 18.9
Subiculum
nTPM: 34.7
Samples: 4

Max nTPM: 39.8
Min nTPM: 30.4
Sample A Female 30.4
Sample B Female 31.7
Sample C Male 39.8
Sample D Male 36.9
Ventral hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 53.3
Min nTPM: 23.9
Sample A Female 28.1
Sample B Female 31.0
Sample C Male 53.3
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.0
Sample A Male 4.0
Sample B Male 4.2
Sample C Female 5.1
Sample D Female 5.4
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.1
Sample A Male 5.1
Sample B Male 5.4
Sample C Female 6.2
Sample D Female 6.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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