HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:869.5 nTPM
HPA:869.5 nTPM
GTEx:845.7 nTPM
FANTOM5:294.0 Scaled Tags Per Million
Pig:620.2 nTPM
Mouse:1496.9 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002485Antibody CAB004080
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 869.5
Sample id Sample description nTPM
Hippocampus
nTPM: 855.7
1898 Male, age 80, left hemisphere 889.3
2529 Female, age 94, left hemisphere 879.3
2621 Female, age 67, right hemisphere 861.8
1855 Male, age 76, left hemisphere 839.0
2148 Female, age 91, left hemisphere 838.0
1911 Female, age 85, right hemisphere 827.0
Dentate gyrus
nTPM: 843.5
2530 Female, age 94, left hemisphere 875.9
1927 Female, age 91, both hemispheres 855.7
2246 Female, age 85, both hemispheres 835.1
2010 Male, age 76, both hemispheres 833.0
2531 Female, age 67, both hemispheres 832.8
2528 Male, age 74, both hemispheres 828.2
Entorhinal gyrus
nTPM: 848.6
2764 Male, age 80, right hemisphere 866.8
1938 Female, age 85, left hemisphere 852.3
1787 Male, age 76, left hemisphere 850.1
2686 Male, age 75, right hemisphere 848.4
2613 Female, age 94, left hemisphere 837.2
2117 Female, age 91, right hemisphere 837.1
Hippocampus, CA1
nTPM: 856.7
2749 Male, age 80, left hemisphere 938.6
2527 Male, age 74, both hemispheres 856.2
1873 Female, age 85, both hemispheres 849.5
2082 Female, age 91, right hemisphere 831.1
2045 Male, age 76, both hemispheres 808.3
Hippocampus, CA2
nTPM: 859.2
1892 Male, age 76, both hemispheres 890.5
1963 Male, age 80, left hemisphere 889.4
2437 Female, age 94, left hemisphere 871.8
2249 Male, age 74, both hemispheres 851.6
2113 Female, age 91, right hemisphere 836.6
1940 Female, age 85, left hemisphere 815.1
Hippocampus, CA3
nTPM: 851.2
2137 Male, age 80, left hemisphere 901.1
2436 Male, age 74, both hemispheres 872.2
1867 Male, age 76, both hemispheres 864.7
2861 Female, age 67, both hemispheres 836.6
1891 Female, age 85, both hemispheres 836.4
2620 Female, age 94, left hemisphere 796.4
Parahippocampal cortex
nTPM: 850.7
2250 Female, age 67, right hemisphere 877.3
2245 Female, age 91, both hemispheres 868.7
1850 Male, age 80, both hemispheres 868.1
1990 Female, age 91, right hemisphere 864.5
1933 Female, age 85, both hemispheres 855.9
2532 Female, age 72, left hemisphere 850.9
2692 Male, age 74, both hemispheres 836.8
2622 Female, age 67, right hemisphere 834.6
2693 Female, age 94, both hemispheres 825.7
2018 Male, age 76, both hemispheres 824.0
Perirhinal gyrus
nTPM: 869.5
1847 Female, age 91, left hemisphere 897.0
1794 Male, age 80, right hemisphere 884.8
1841 Female, age 85, right hemisphere 870.2
2521 Female, age 94, right hemisphere 864.8
2848 Male, age 76, right hemisphere 830.4
Subiculum
nTPM: 842.2
1901 Male, age 80, both hemispheres 867.2
1977 Female, age 85, both hemispheres 860.4
2438 Female, age 94, left hemisphere 857.2
2619 Male, age 74, both hemispheres 837.5
2042 Male, age 76, both hemispheres 825.3
2729 Female, age 91, right hemisphere 805.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 845.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 845.7
Samples: 197

Max nTPM: 2754.3
Min nTPM: 406.7
Std nTPM: 282.7
Median nTPM: 796.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2754.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1760.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1745.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1705.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1695.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1527.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1523.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1402.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1373.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1363.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 1293.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 294.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 294.0
FF:10169-103B7 60 years, female 354.7
FF:10153-102I9 76 years, female 233.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 620.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 611.6
Samples: 4

Max nTPM: 802.7
Min nTPM: 444.0
Sample A Female 802.7
Sample B Female 503.2
Sample C Male 696.6
Sample D Male 444.0
Entorhinal cortex
nTPM: 620.2
Samples: 4

Max nTPM: 699.0
Min nTPM: 527.6
Sample A Female 616.8
Sample B Female 699.0
Sample C Male 637.3
Sample D Male 527.6
Subiculum
nTPM: 509.9
Samples: 4

Max nTPM: 717.6
Min nTPM: 435.3
Sample A Female 717.6
Sample B Female 445.4
Sample C Male 441.4
Sample D Male 435.3
Ventral hippocampus
nTPM: 525.6
Samples: 4

Max nTPM: 648.7
Min nTPM: 370.7
Sample A Female 538.3
Sample B Female 370.7
Sample C Male 648.7
Sample D Male 544.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1496.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1496.9
Samples: 4

Max nTPM: 1563.4
Min nTPM: 1454.4
Sample A Male 1454.4
Sample B Male 1507.5
Sample C Female 1563.4
Sample D Female 1462.1
Hippocampal formation
nTPM: 1457.8
Samples: 4

Max nTPM: 1636.5
Min nTPM: 1336.8
Sample A Male 1636.5
Sample B Male 1351.4
Sample C Female 1336.8
Sample D Female 1506.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
73992933 Antisense, RP_051214_03_C11, Mouse strain C57BL/6J (56 days, male) 13.5
69568980 Antisense, RP_050426_03_C01, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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