HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.6 nTPM
HPA:82.6 nTPM
GTEx:81.8 nTPM
FANTOM5:101.6 Scaled Tags Per Million
Pig:108.1 nTPM
Mouse:225.0 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030124
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.6
Sample id Sample description nTPM
Hippocampus
nTPM: 77.9
1898 Male, age 80, left hemisphere 84.6
1855 Male, age 76, left hemisphere 81.8
2529 Female, age 94, left hemisphere 77.1
2621 Female, age 67, right hemisphere 76.9
1911 Female, age 85, right hemisphere 76.2
2148 Female, age 91, left hemisphere 71.2
Dentate gyrus
nTPM: 75.1
2010 Male, age 76, both hemispheres 87.0
2246 Female, age 85, both hemispheres 76.2
2528 Male, age 74, both hemispheres 76.0
1927 Female, age 91, both hemispheres 73.7
2530 Female, age 94, left hemisphere 72.9
2531 Female, age 67, both hemispheres 64.7
Entorhinal gyrus
nTPM: 76.9
1938 Female, age 85, left hemisphere 81.7
2117 Female, age 91, right hemisphere 81.2
1787 Male, age 76, left hemisphere 80.5
2764 Male, age 80, right hemisphere 76.9
2613 Female, age 94, left hemisphere 71.8
2686 Male, age 75, right hemisphere 69.0
Hippocampus, CA1
nTPM: 79.3
2749 Male, age 80, left hemisphere 88.5
2045 Male, age 76, both hemispheres 81.2
2082 Female, age 91, right hemisphere 75.9
2527 Male, age 74, both hemispheres 75.7
1873 Female, age 85, both hemispheres 75.1
Hippocampus, CA2
nTPM: 82.6
1892 Male, age 76, both hemispheres 98.3
1963 Male, age 80, left hemisphere 84.8
1940 Female, age 85, left hemisphere 81.8
2249 Male, age 74, both hemispheres 79.2
2113 Female, age 91, right hemisphere 76.4
2437 Female, age 94, left hemisphere 75.2
Hippocampus, CA3
nTPM: 78.7
1867 Male, age 76, both hemispheres 102.4
2137 Male, age 80, left hemisphere 86.7
1891 Female, age 85, both hemispheres 79.4
2436 Male, age 74, both hemispheres 72.2
2861 Female, age 67, both hemispheres 66.8
2620 Female, age 94, left hemisphere 64.9
Parahippocampal cortex
nTPM: 76.3
2018 Male, age 76, both hemispheres 84.7
1850 Male, age 80, both hemispheres 80.0
1933 Female, age 85, both hemispheres 79.8
2250 Female, age 67, right hemisphere 78.7
2532 Female, age 72, left hemisphere 77.9
1990 Female, age 91, right hemisphere 76.9
2245 Female, age 91, both hemispheres 74.2
2692 Male, age 74, both hemispheres 73.5
2693 Female, age 94, both hemispheres 71.0
2622 Female, age 67, right hemisphere 66.0
Perirhinal gyrus
nTPM: 81.1
1847 Female, age 91, left hemisphere 86.8
2521 Female, age 94, right hemisphere 82.7
1794 Male, age 80, right hemisphere 79.5
1841 Female, age 85, right hemisphere 79.0
2848 Male, age 76, right hemisphere 77.4
Subiculum
nTPM: 79.6
2042 Male, age 76, both hemispheres 87.0
1901 Male, age 80, both hemispheres 83.1
1977 Female, age 85, both hemispheres 80.3
2619 Male, age 74, both hemispheres 76.6
2438 Female, age 94, left hemisphere 76.3
2729 Female, age 91, right hemisphere 74.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.8
Samples: 197

Max nTPM: 130.1
Min nTPM: 49.7
Std nTPM: 13.7
Median nTPM: 80.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 130.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 121.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 121.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 121.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 117.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 115.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 112.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 111.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 110.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 109.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 107.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.6
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 99.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 108.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 108.1
Samples: 4

Max nTPM: 141.1
Min nTPM: 80.5
Sample A Female 141.1
Sample B Female 99.2
Sample C Male 111.5
Sample D Male 80.5
Entorhinal cortex
nTPM: 90.9
Samples: 4

Max nTPM: 105.2
Min nTPM: 72.1
Sample A Female 101.2
Sample B Female 105.2
Sample C Male 85.2
Sample D Male 72.1
Subiculum
nTPM: 90.7
Samples: 4

Max nTPM: 119.7
Min nTPM: 77.2
Sample A Female 119.7
Sample B Female 82.3
Sample C Male 77.2
Sample D Male 83.4
Ventral hippocampus
nTPM: 85.5
Samples: 4

Max nTPM: 107.8
Min nTPM: 63.2
Sample A Female 81.4
Sample B Female 63.2
Sample C Male 89.6
Sample D Male 107.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 225.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.3
Samples: 4

Max nTPM: 191.0
Min nTPM: 165.8
Sample A Male 165.8
Sample B Male 168.2
Sample C Female 191.0
Sample D Female 188.1
Hippocampal formation
nTPM: 225.0
Samples: 4

Max nTPM: 243.5
Min nTPM: 212.9
Sample A Male 220.0
Sample B Male 223.4
Sample C Female 243.5
Sample D Female 212.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
76081921 Antisense, RP_060626_01_A01, Mouse strain C57BL/6J (56 days, male) 16.9
323396 Antisense, RP_040617_01_A03, Mouse strain C57BL/6J (56 days, male) 13.9

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The Human Protein Atlas

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