HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:94.2 nTPM
HPA:94.2 nTPM
GTEx:81.4 nTPM
FANTOM5:397.4 Scaled Tags Per Million
Pig:325.2 nTPM
Mouse:671.6 nTPM
Allen mouse:23.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009682
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 94.2
Sample id Sample description nTPM
Hippocampus
nTPM: 67.7
1898 Male, age 80, left hemisphere 96.3
1855 Male, age 76, left hemisphere 67.0
2621 Female, age 67, right hemisphere 64.7
1911 Female, age 85, right hemisphere 62.0
2148 Female, age 91, left hemisphere 59.0
2529 Female, age 94, left hemisphere 56.9
Dentate gyrus
nTPM: 69.2
1927 Female, age 91, both hemispheres 90.0
2010 Male, age 76, both hemispheres 73.5
2528 Male, age 74, both hemispheres 70.2
2246 Female, age 85, both hemispheres 64.8
2530 Female, age 94, left hemisphere 62.9
2531 Female, age 67, both hemispheres 53.7
Entorhinal gyrus
nTPM: 75.0
1938 Female, age 85, left hemisphere 90.2
2613 Female, age 94, left hemisphere 81.4
2764 Male, age 80, right hemisphere 80.9
1787 Male, age 76, left hemisphere 76.7
2117 Female, age 91, right hemisphere 64.3
2686 Male, age 75, right hemisphere 56.6
Hippocampus, CA1
nTPM: 79.1
2749 Male, age 80, left hemisphere 116.1
1873 Female, age 85, both hemispheres 78.8
2045 Male, age 76, both hemispheres 69.0
2527 Male, age 74, both hemispheres 68.6
2082 Female, age 91, right hemisphere 63.0
Hippocampus, CA2
nTPM: 74.7
1892 Male, age 76, both hemispheres 95.0
1963 Male, age 80, left hemisphere 84.8
2249 Male, age 74, both hemispheres 73.0
1940 Female, age 85, left hemisphere 68.6
2437 Female, age 94, left hemisphere 64.1
2113 Female, age 91, right hemisphere 62.7
Hippocampus, CA3
nTPM: 71.9
2137 Male, age 80, left hemisphere 96.5
1867 Male, age 76, both hemispheres 77.6
2436 Male, age 74, both hemispheres 74.3
1891 Female, age 85, both hemispheres 68.4
2620 Female, age 94, left hemisphere 61.0
2861 Female, age 67, both hemispheres 53.6
Parahippocampal cortex
nTPM: 75.6
1850 Male, age 80, both hemispheres 98.9
1990 Female, age 91, right hemisphere 89.8
1933 Female, age 85, both hemispheres 83.7
2250 Female, age 67, right hemisphere 81.2
2693 Female, age 94, both hemispheres 78.3
2245 Female, age 91, both hemispheres 72.9
2532 Female, age 72, left hemisphere 67.4
2018 Male, age 76, both hemispheres 65.8
2692 Male, age 74, both hemispheres 62.0
2622 Female, age 67, right hemisphere 56.4
Perirhinal gyrus
nTPM: 94.2
1847 Female, age 91, left hemisphere 113.0
1794 Male, age 80, right hemisphere 96.1
1841 Female, age 85, right hemisphere 95.6
2521 Female, age 94, right hemisphere 86.0
2848 Male, age 76, right hemisphere 80.5
Subiculum
nTPM: 65.4
1977 Female, age 85, both hemispheres 79.5
1901 Male, age 80, both hemispheres 78.1
2619 Male, age 74, both hemispheres 59.7
2729 Female, age 91, right hemisphere 59.4
2438 Female, age 94, left hemisphere 59.0
2042 Male, age 76, both hemispheres 57.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.4
Samples: 197

Max nTPM: 193.0
Min nTPM: 31.3
Std nTPM: 32.6
Median nTPM: 78.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 193.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 171.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 164.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 152.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 151.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 149.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 149.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 146.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 145.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 141.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 397.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 397.4
FF:10169-103B7 60 years, female 502.2
FF:10153-102I9 76 years, female 292.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 325.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 318.9
Samples: 4

Max nTPM: 398.8
Min nTPM: 234.7
Sample A Female 398.8
Sample B Female 353.7
Sample C Male 288.5
Sample D Male 234.7
Entorhinal cortex
nTPM: 310.1
Samples: 4

Max nTPM: 353.0
Min nTPM: 255.5
Sample A Female 317.4
Sample B Female 353.0
Sample C Male 314.6
Sample D Male 255.5
Subiculum
nTPM: 325.2
Samples: 4

Max nTPM: 429.5
Min nTPM: 281.0
Sample A Female 429.5
Sample B Female 303.2
Sample C Male 287.1
Sample D Male 281.0
Ventral hippocampus
nTPM: 294.9
Samples: 4

Max nTPM: 342.6
Min nTPM: 216.0
Sample A Female 328.4
Sample B Female 216.0
Sample C Male 342.6
Sample D Male 292.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 671.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 671.6
Samples: 4

Max nTPM: 731.1
Min nTPM: 620.4
Sample A Male 620.4
Sample B Male 731.1
Sample C Female 664.6
Sample D Female 670.4
Hippocampal formation
nTPM: 618.6
Samples: 4

Max nTPM: 716.9
Min nTPM: 566.7
Sample A Male 716.9
Sample B Male 591.2
Sample C Female 599.6
Sample D Female 566.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.5
72715 Antisense, RP_040407_01_H06, Mouse strain C57BL/6J (56 days, male) 23.5

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