HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:176.0 nTPM
HPA:176.0 nTPM
GTEx:156.9 nTPM
FANTOM5:76.3 Scaled Tags Per Million
Pig:93.3 nTPM
Mouse:51.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 176.0
Sample id Sample description nTPM
Hippocampus
nTPM: 168.1
2529 Female, age 94, left hemisphere 175.3
1911 Female, age 85, right hemisphere 174.1
1898 Male, age 80, left hemisphere 174.0
2148 Female, age 91, left hemisphere 164.6
2621 Female, age 67, right hemisphere 161.0
1855 Male, age 76, left hemisphere 159.6
Dentate gyrus
nTPM: 163.6
2530 Female, age 94, left hemisphere 168.2
2528 Male, age 74, both hemispheres 168.0
2246 Female, age 85, both hemispheres 167.3
2010 Male, age 76, both hemispheres 165.6
1927 Female, age 91, both hemispheres 162.7
2531 Female, age 67, both hemispheres 149.9
Entorhinal gyrus
nTPM: 153.8
2117 Female, age 91, right hemisphere 169.6
1787 Male, age 76, left hemisphere 157.7
1938 Female, age 85, left hemisphere 156.1
2764 Male, age 80, right hemisphere 151.5
2686 Male, age 75, right hemisphere 150.1
2613 Female, age 94, left hemisphere 137.8
Hippocampus, CA1
nTPM: 176.0
2749 Male, age 80, left hemisphere 213.1
2527 Male, age 74, both hemispheres 177.5
1873 Female, age 85, both hemispheres 172.5
2082 Female, age 91, right hemisphere 165.2
2045 Male, age 76, both hemispheres 151.8
Hippocampus, CA2
nTPM: 164.6
1963 Male, age 80, left hemisphere 172.0
2249 Male, age 74, both hemispheres 171.8
1940 Female, age 85, left hemisphere 162.9
2113 Female, age 91, right hemisphere 162.4
2437 Female, age 94, left hemisphere 161.3
1892 Male, age 76, both hemispheres 157.2
Hippocampus, CA3
nTPM: 168.3
2137 Male, age 80, left hemisphere 198.5
2436 Male, age 74, both hemispheres 166.3
1867 Male, age 76, both hemispheres 163.5
1891 Female, age 85, both hemispheres 161.2
2620 Female, age 94, left hemisphere 160.8
2861 Female, age 67, both hemispheres 159.6
Parahippocampal cortex
nTPM: 152.6
2245 Female, age 91, both hemispheres 163.7
2250 Female, age 67, right hemisphere 161.7
1933 Female, age 85, both hemispheres 159.6
2692 Male, age 74, both hemispheres 157.2
2018 Male, age 76, both hemispheres 156.6
2622 Female, age 67, right hemisphere 155.4
1990 Female, age 91, right hemisphere 150.4
1850 Male, age 80, both hemispheres 142.0
2693 Female, age 94, both hemispheres 141.3
2532 Female, age 72, left hemisphere 138.5
Perirhinal gyrus
nTPM: 150.9
1794 Male, age 80, right hemisphere 158.6
1847 Female, age 91, left hemisphere 156.0
2521 Female, age 94, right hemisphere 153.6
1841 Female, age 85, right hemisphere 149.2
2848 Male, age 76, right hemisphere 137.0
Subiculum
nTPM: 162.8
2619 Male, age 74, both hemispheres 172.6
1901 Male, age 80, both hemispheres 170.1
2042 Male, age 76, both hemispheres 163.6
2729 Female, age 91, right hemisphere 163.2
1977 Female, age 85, both hemispheres 153.9
2438 Female, age 94, left hemisphere 153.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 156.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 156.9
Samples: 197

Max nTPM: 339.5
Min nTPM: 44.2
Std nTPM: 52.1
Median nTPM: 155.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 339.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 308.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 299.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 296.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 284.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 284.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 277.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 277.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 272.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 252.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 249.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.3
FF:10153-102I9 76 years, female 85.6
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 93.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.8
Samples: 4

Max nTPM: 91.3
Min nTPM: 48.4
Sample A Female 91.3
Sample B Female 61.4
Sample C Male 86.2
Sample D Male 48.4
Entorhinal cortex
nTPM: 86.4
Samples: 4

Max nTPM: 111.3
Min nTPM: 76.9
Sample A Female 76.9
Sample B Female 79.0
Sample C Male 111.3
Sample D Male 78.5
Subiculum
nTPM: 93.3
Samples: 4

Max nTPM: 124.8
Min nTPM: 70.6
Sample A Female 124.8
Sample B Female 91.8
Sample C Male 70.6
Sample D Male 86.1
Ventral hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 99.8
Min nTPM: 59.7
Sample A Female 90.9
Sample B Female 62.6
Sample C Male 99.8
Sample D Male 59.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.1
Samples: 4

Max nTPM: 56.3
Min nTPM: 48.6
Sample A Male 48.6
Sample B Male 50.5
Sample C Female 56.3
Sample D Female 48.9
Hippocampal formation
nTPM: 47.9
Samples: 4

Max nTPM: 52.9
Min nTPM: 42.9
Sample A Male 52.9
Sample B Male 44.4
Sample C Female 42.9
Sample D Female 51.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
1912 Antisense, RP_040428_01_C05, Mouse strain C57BL/6J (56 days, male) 0.8
1913 Antisense, RP_040428_01_C05, Mouse strain C57BL/6J (56 days, male) 0.5
68498944 Antisense, RP_050113_02_F08, Mouse strain C57BL/6J (56 days, male) 0.1

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