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TISSUE RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:213.3 nTPM
GTEx:213.3 nTPM
FANTOM5:98.3 Scaled Tags Per Million

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 213.3
GTEx sample id Sample description nTPM
Retina
Average nTPM: 213.3
Samples: 105

Max nTPM: 282.4
Min nTPM: 148.4
Std nTPM: 26.7
Median nTPM:
308_1 70 years, female 282.4
414_1 84 years, female 270.1
162_1 79 years, female 267.5
379_1 60 years, male 255.9
99_1 64 years, male 254.6
404_1 82 years, female 252.7
415_1 77 years, female 252.1
347_1 72 years, male 248.3
145_1 84 years, male 247.1
177_1 74 years, male 245.4
189_1 76 years, male 245.1
117_1 61 years, male 244.2
243_1 75 years, male 243.0
120_1 70 years, female 242.9
115_1 83 years, male 240.6
119_1 70 years, female 239.9
413_1 59 years, female 238.9
81_1 67 years, male 238.6
246_1 77 years, male 238.3
490_1 67 years, female 238.2
491_1 89 years, female 238.2
317_1 60 years, male 237.4
324_1 76 years, male 236.9
173_1 67 years, male 236.3
425_1 59 years, female 235.2
499_1 55 years, female 234.4
447_1 81 years, male 233.8
229_1 69 years, female 231.9
126_1 63 years, male 231.7
313_1 79 years, female 231.4
526_1 61 years, male 231.1
386_1 76 years, male 229.5
468_1 89 years, male 228.4
142_1 61 years, female 228.0
42_1 85 years, male 227.9
376_1 75 years, female 227.0
315_1 62 years, female 226.7
307_1 66 years, female 226.4
377_1 82 years, female 224.5
452_1 88 years, female 223.9
495_1 57 years, female 223.4
266_1 85 years, male 222.7
254_1 77 years, female 221.6
466_1 57 years, female 220.8
321_1 62 years, female 219.8
389_1 86 years, female 219.8
265_1 87 years, male 219.1
41_1 94 years, female 218.5
349_1 83 years, male 218.2
394_1 75 years, female 217.9
319_1 81 years, male 217.5
18_1 88 years, male 217.2
480_1 63 years, male 216.2
375_1 74 years, female 215.3
89_1 63 years, male 214.2
109_1 81 years, female 214.1
35_1 74 years, female 213.5
17_1 71 years, male 211.0
6_1 73 years, female 210.0
9_1 66 years, female 210.0
384_1 83 years, male 208.8
396_1 62 years, male 208.1
501_1 88 years, male 207.7
311_1 78 years, male 207.0
172_1 72 years, female 205.9
405_1 91 years, male 205.9
137_1 83 years, male 205.8
335_1 73 years, female 205.8
406_1 79 years, male 202.8
153_1 70 years, female 202.3
286_1 68 years, female 201.6
218_1 71 years, female 201.5
2_1 77 years, female 200.4
4_1 88 years, female 198.5
351_1 91 years, male 196.0
355_1 70 years, female 195.9
32_1 67 years, male 195.2
350_1 84 years, female 194.0
149_1 88 years, male 192.6
352_1 62 years, male 191.6
163_1 78 years, male 191.0
322_1 76 years, male 191.0
316_1 62 years, male 189.3
518_1 75 years, female 187.9
237_1 82 years, male 187.1
139_1 64 years, female 185.7
217_1 76 years, male 185.1
288_1 66 years, female 182.1
503_1 68 years, male 181.8
506_1 65 years, male 181.4
43_1 64 years, female 179.9
356_1 87 years, female 179.8
264_1 73 years, female 178.9
292_1 71 years, male 178.5
354_1 81 years, female 178.2
517_1 88 years, male 174.9
348_1 84 years, male 173.0
353_1 82 years, female 172.8
293_1 68 years, female 170.2
291_1 76 years, male 166.4
314_1 67 years, male 165.6
318_1 68 years, male 165.4
295_1 61 years, female 163.2
251_1 78 years, male 161.9
320_1 89 years, female 148.4
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RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 98.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 98.3
FF:10030-101E3 24-65 years, mixed 98.3

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