HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:18.0 nTPM
FANTOM5:37.3 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:30.8 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.8
1855 Male, age 76, left hemisphere 28.2
2148 Female, age 91, left hemisphere 25.6
2529 Female, age 94, left hemisphere 25.5
2621 Female, age 67, right hemisphere 25.3
1898 Male, age 80, left hemisphere 25.2
1911 Female, age 85, right hemisphere 24.8
Dentate gyrus
nTPM: 25.3
2530 Female, age 94, left hemisphere 26.4
1927 Female, age 91, both hemispheres 26.2
2010 Male, age 76, both hemispheres 25.7
2531 Female, age 67, both hemispheres 25.0
2528 Male, age 74, both hemispheres 24.9
2246 Female, age 85, both hemispheres 23.8
Entorhinal gyrus
nTPM: 25.2
1787 Male, age 76, left hemisphere 26.1
2613 Female, age 94, left hemisphere 26.0
2764 Male, age 80, right hemisphere 26.0
1938 Female, age 85, left hemisphere 25.0
2117 Female, age 91, right hemisphere 24.3
2686 Male, age 75, right hemisphere 24.0
Hippocampus, CA1
nTPM: 26.5
2749 Male, age 80, left hemisphere 29.4
2045 Male, age 76, both hemispheres 27.7
1873 Female, age 85, both hemispheres 26.0
2527 Male, age 74, both hemispheres 25.0
2082 Female, age 91, right hemisphere 24.4
Hippocampus, CA2
nTPM: 26.6
1892 Male, age 76, both hemispheres 29.7
1963 Male, age 80, left hemisphere 28.7
2249 Male, age 74, both hemispheres 26.2
2437 Female, age 94, left hemisphere 25.5
1940 Female, age 85, left hemisphere 25.0
2113 Female, age 91, right hemisphere 24.6
Hippocampus, CA3
nTPM: 29.8
2436 Male, age 74, both hemispheres 44.0
2137 Male, age 80, left hemisphere 29.3
1867 Male, age 76, both hemispheres 27.9
2620 Female, age 94, left hemisphere 26.2
2861 Female, age 67, both hemispheres 25.7
1891 Female, age 85, both hemispheres 25.5
Parahippocampal cortex
nTPM: 24.8
1850 Male, age 80, both hemispheres 26.1
2692 Male, age 74, both hemispheres 26.1
2622 Female, age 67, right hemisphere 25.6
2532 Female, age 72, left hemisphere 25.5
1990 Female, age 91, right hemisphere 24.9
2018 Male, age 76, both hemispheres 24.6
1933 Female, age 85, both hemispheres 24.5
2245 Female, age 91, both hemispheres 24.1
2693 Female, age 94, both hemispheres 23.5
2250 Female, age 67, right hemisphere 23.2
Perirhinal gyrus
nTPM: 25.0
1847 Female, age 91, left hemisphere 26.4
1794 Male, age 80, right hemisphere 25.4
1841 Female, age 85, right hemisphere 24.9
2848 Male, age 76, right hemisphere 24.7
2521 Female, age 94, right hemisphere 23.8
Subiculum
nTPM: 25.2
2042 Male, age 76, both hemispheres 26.2
1977 Female, age 85, both hemispheres 25.7
1901 Male, age 80, both hemispheres 25.2
2729 Female, age 91, right hemisphere 24.9
2438 Female, age 94, left hemisphere 24.7
2619 Male, age 74, both hemispheres 24.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 27.4
Min nTPM: 10.2
Std nTPM: 3.0
Median nTPM: 17.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 24.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 24.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 24.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 23.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 23.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 23.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 23.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 23.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.3
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 33.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.2
Sample A Female 17.3
Sample B Female 15.6
Sample C Male 11.5
Sample D Male 11.2
Entorhinal cortex
nTPM: 11.8
Samples: 4

Max nTPM: 12.7
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 11.6
Sample C Male 12.7
Sample D Male 11.5
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.1
Sample A Female 13.1
Sample B Female 11.3
Sample C Male 10.6
Sample D Male 10.1
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.8
Sample A Female 15.2
Sample B Female 10.8
Sample C Male 15.4
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.5
Samples: 4

Max nTPM: 28.5
Min nTPM: 22.6
Sample A Male 27.7
Sample B Male 28.5
Sample C Female 27.2
Sample D Female 22.6
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 33.1
Min nTPM: 28.1
Sample A Male 33.1
Sample B Male 29.7
Sample C Female 32.4
Sample D Female 28.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.