HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.0 nTPM
HPA:41.0 nTPM
GTEx:40.2 nTPM
FANTOM5:113.7 Scaled Tags Per Million
Pig:26.9 nTPM
Mouse:88.9 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036984Antibody HPA036985
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.0
Sample id Sample description nTPM
Hippocampus
nTPM: 38.1
1898 Male, age 80, left hemisphere 43.3
2148 Female, age 91, left hemisphere 39.1
2529 Female, age 94, left hemisphere 38.9
1855 Male, age 76, left hemisphere 37.0
2621 Female, age 67, right hemisphere 35.2
1911 Female, age 85, right hemisphere 34.8
Dentate gyrus
nTPM: 37.9
2528 Male, age 74, both hemispheres 39.9
1927 Female, age 91, both hemispheres 39.8
2010 Male, age 76, both hemispheres 39.8
2530 Female, age 94, left hemisphere 37.8
2246 Female, age 85, both hemispheres 35.7
2531 Female, age 67, both hemispheres 34.7
Entorhinal gyrus
nTPM: 35.0
2764 Male, age 80, right hemisphere 35.7
1938 Female, age 85, left hemisphere 35.3
2117 Female, age 91, right hemisphere 35.3
2686 Male, age 75, right hemisphere 34.8
1787 Male, age 76, left hemisphere 34.5
2613 Female, age 94, left hemisphere 34.5
Hippocampus, CA1
nTPM: 41.0
2749 Male, age 80, left hemisphere 52.9
1873 Female, age 85, both hemispheres 41.2
2527 Male, age 74, both hemispheres 37.8
2082 Female, age 91, right hemisphere 36.6
2045 Male, age 76, both hemispheres 36.3
Hippocampus, CA2
nTPM: 39.8
1892 Male, age 76, both hemispheres 47.3
1963 Male, age 80, left hemisphere 45.6
2249 Male, age 74, both hemispheres 40.6
2113 Female, age 91, right hemisphere 36.4
2437 Female, age 94, left hemisphere 35.2
1940 Female, age 85, left hemisphere 33.4
Hippocampus, CA3
nTPM: 40.1
2137 Male, age 80, left hemisphere 48.2
1867 Male, age 76, both hemispheres 42.1
2436 Male, age 74, both hemispheres 41.3
2620 Female, age 94, left hemisphere 40.2
1891 Female, age 85, both hemispheres 36.2
2861 Female, age 67, both hemispheres 32.7
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 40.9
2245 Female, age 91, both hemispheres 37.0
1990 Female, age 91, right hemisphere 36.4
2692 Male, age 74, both hemispheres 35.4
2018 Male, age 76, both hemispheres 34.9
1933 Female, age 85, both hemispheres 34.1
2693 Female, age 94, both hemispheres 33.6
2532 Female, age 72, left hemisphere 33.0
2250 Female, age 67, right hemisphere 32.9
2622 Female, age 67, right hemisphere 31.2
Perirhinal gyrus
nTPM: 37.9
1847 Female, age 91, left hemisphere 39.4
1794 Male, age 80, right hemisphere 39.0
1841 Female, age 85, right hemisphere 38.3
2848 Male, age 76, right hemisphere 36.6
2521 Female, age 94, right hemisphere 36.0
Subiculum
nTPM: 35.7
1901 Male, age 80, both hemispheres 40.0
2619 Male, age 74, both hemispheres 35.3
2729 Female, age 91, right hemisphere 35.3
2042 Male, age 76, both hemispheres 34.9
1977 Female, age 85, both hemispheres 34.8
2438 Female, age 94, left hemisphere 34.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.2
Samples: 197

Max nTPM: 80.1
Min nTPM: 21.3
Std nTPM: 9.0
Median nTPM: 38.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 80.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 67.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 66.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 64.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 62.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 61.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 60.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 59.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 58.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 57.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.7
FF:10169-103B7 60 years, female 122.4
FF:10153-102I9 76 years, female 105.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 22.6
Sample A Female 31.4
Sample B Female 27.4
Sample C Male 26.2
Sample D Male 22.6
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 25.0
Min nTPM: 20.7
Sample A Female 20.9
Sample B Female 25.0
Sample C Male 22.1
Sample D Male 20.7
Subiculum
nTPM: 24.9
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.1
Sample A Female 26.5
Sample B Female 23.1
Sample C Male 26.1
Sample D Male 23.7
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 30.2
Min nTPM: 22.3
Sample A Female 30.2
Sample B Female 22.3
Sample C Male 26.0
Sample D Male 24.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.9
Samples: 4

Max nTPM: 94.9
Min nTPM: 86.1
Sample A Male 87.6
Sample B Male 94.9
Sample C Female 86.1
Sample D Female 86.9
Hippocampal formation
nTPM: 86.8
Samples: 4

Max nTPM: 91.1
Min nTPM: 84.0
Sample A Male 91.1
Sample B Male 84.0
Sample C Female 84.3
Sample D Female 87.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
73994670 Antisense, RP_051214_03_E05, Mouse strain C57BL/6J (56 days, male) 2.1
69734608 Antisense, RP_050503_01_C06, Mouse strain C57BL/6J (56 days, male) 2.0

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