HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.3 nTPM
HPA:30.3 nTPM
GTEx:44.4 nTPM
FANTOM5:73.5 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:23.2 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067540
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
2621 Female, age 67, right hemisphere 32.2
1855 Male, age 76, left hemisphere 30.8
2529 Female, age 94, left hemisphere 30.6
1898 Male, age 80, left hemisphere 30.1
2148 Female, age 91, left hemisphere 29.5
1911 Female, age 85, right hemisphere 28.8
Dentate gyrus
nTPM: 29.6
2530 Female, age 94, left hemisphere 31.3
2246 Female, age 85, both hemispheres 30.2
2010 Male, age 76, both hemispheres 29.9
2531 Female, age 67, both hemispheres 29.8
2528 Male, age 74, both hemispheres 28.2
1927 Female, age 91, both hemispheres 28.1
Entorhinal gyrus
nTPM: 30.1
2613 Female, age 94, left hemisphere 30.6
1787 Male, age 76, left hemisphere 30.5
2117 Female, age 91, right hemisphere 30.5
2764 Male, age 80, right hemisphere 30.5
2686 Male, age 75, right hemisphere 29.6
1938 Female, age 85, left hemisphere 29.0
Hippocampus, CA1
nTPM: 29.1
2749 Male, age 80, left hemisphere 30.6
2527 Male, age 74, both hemispheres 29.2
2045 Male, age 76, both hemispheres 29.0
1873 Female, age 85, both hemispheres 28.7
2082 Female, age 91, right hemisphere 27.9
Hippocampus, CA2
nTPM: 29.4
1940 Female, age 85, left hemisphere 30.4
1892 Male, age 76, both hemispheres 30.2
2437 Female, age 94, left hemisphere 30.1
2249 Male, age 74, both hemispheres 28.9
2113 Female, age 91, right hemisphere 28.7
1963 Male, age 80, left hemisphere 28.4
Hippocampus, CA3
nTPM: 29.2
2620 Female, age 94, left hemisphere 30.9
2861 Female, age 67, both hemispheres 30.5
2436 Male, age 74, both hemispheres 28.8
1891 Female, age 85, both hemispheres 28.6
2137 Male, age 80, left hemisphere 28.3
1867 Male, age 76, both hemispheres 28.2
Parahippocampal cortex
nTPM: 29.8
2245 Female, age 91, both hemispheres 31.5
2532 Female, age 72, left hemisphere 31.3
2622 Female, age 67, right hemisphere 31.0
2692 Male, age 74, both hemispheres 30.2
2018 Male, age 76, both hemispheres 29.6
1850 Male, age 80, both hemispheres 29.3
2250 Female, age 67, right hemisphere 29.3
1990 Female, age 91, right hemisphere 29.1
1933 Female, age 85, both hemispheres 29.0
2693 Female, age 94, both hemispheres 27.6
Perirhinal gyrus
nTPM: 30.0
1794 Male, age 80, right hemisphere 31.5
2848 Male, age 76, right hemisphere 30.6
1847 Female, age 91, left hemisphere 30.2
2521 Female, age 94, right hemisphere 29.0
1841 Female, age 85, right hemisphere 28.8
Subiculum
nTPM: 30.1
2438 Female, age 94, left hemisphere 32.3
1901 Male, age 80, both hemispheres 30.4
2619 Male, age 74, both hemispheres 30.0
2042 Male, age 76, both hemispheres 29.6
2729 Female, age 91, right hemisphere 29.4
1977 Female, age 85, both hemispheres 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 96.5
Min nTPM: 24.7
Std nTPM: 10.8
Median nTPM: 43.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 96.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 77.4
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 77.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 73.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 73.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 72.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 72.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 71.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 68.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 64.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 63.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.5
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 72.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 38.3
Min nTPM: 25.0
Sample A Female 38.3
Sample B Female 25.1
Sample C Male 29.1
Sample D Male 25.0
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 28.5
Min nTPM: 21.5
Sample A Female 28.5
Sample B Female 21.5
Sample C Male 23.1
Sample D Male 22.5
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 32.8
Min nTPM: 22.3
Sample A Female 32.8
Sample B Female 22.3
Sample C Male 24.1
Sample D Male 22.8
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 33.1
Min nTPM: 19.0
Sample A Female 27.8
Sample B Female 19.0
Sample C Male 33.1
Sample D Male 28.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 23.9
Min nTPM: 19.8
Sample A Male 23.9
Sample B Male 21.4
Sample C Female 22.3
Sample D Female 19.8
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.5
Sample A Male 26.6
Sample B Male 20.9
Sample C Female 20.5
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
68301658 Antisense, RP_041130_01_F02, Mouse strain C57BL/6J (56 days, male) 7.6

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