PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:270.8 nTPM
HPA:270.8 nTPM
FANTOM5:410.7 Scaled Tags Per Million
Pig:183.7 nTPM
Mouse:8.7 nTPM
Allen mouse:0.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 270.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 168.4
2301 Female, age 85, both hemispheres 235.5
2090 Male, age 80, both hemispheres 185.6
2188 Female, age 91, both hemispheres 153.4
1984 Male, age 76, both hemispheres 99.1
Area postrema
nTPM: 110.0
2306 Male, age 80, both hemispheres 191.0
2799 Male, age 61, both hemispheres 72.8
2054 Male, age 76, both hemispheres 66.3
Cuneate nuclei
nTPM: 197.5
2376 Male, age 61, both hemispheres 275.9
2381 Male, age 80, both hemispheres 182.0
2131 Male, age 76, both hemispheres 134.6
Dorsal cochlear nucleus
nTPM: 124.2
2187 Female, age 91, both hemispheres 156.7
2378 Male, age 80, both hemispheres 124.5
2370 Male, age 61, both hemispheres 120.5
2802 Male, age 74, right hemisphere 116.8
2058 Male, age 76, both hemispheres 102.5
Dorsal medullary reticular nucleus
nTPM: 152.2
2373 Male, age 61, both hemispheres 200.7
2088 Male, age 76, both hemispheres 136.7
2040 Female, age 85, both hemispheres 119.1
Dorsal motor vagal complex
nTPM: 91.8
2185 Male, age 76, both hemispheres 164.3
2000 Male, age 74, unknown 97.3
2807 Female, age 85, both hemispheres 89.2
2133 Female, age 91, both hemispheres 83.6
2643 Male, age 74, both hemispheres 82.0
2797 Male, age 61, both hemispheres 75.8
2844 Male, age 55, unknown 75.4
2813 Female, age 72, unknown 66.9
Dorsal tegmental nucleus
nTPM: 109.1
2083 Male, age 80, both hemispheres 150.5
2326 Male, age 74, both hemispheres 115.6
1936 Male, age 76, left hemisphere 97.0
2358 Male, age 61, both hemispheres 73.5
Dorsolateral tegmental area
nTPM: 125.3
2751 Female, age 85, both hemispheres 195.9
2337 Male, age 61, both hemispheres 161.1
2654 Male, age 80, both hemispheres 139.8
2360 Male, age 74, both hemispheres 74.8
2141 Male, age 76, both hemispheres 55.1
Gigantocellular reticular nuclei, medullary
nTPM: 165.0
2314 Male, age 61, both hemispheres 380.0
2387 Female, age 91, both hemispheres 146.7
1876 Female, age 85, both hemispheres 143.7
2310 Male, age 80, both hemispheres 141.2
2022 Male, age 76, right hemisphere 96.8
2462 Male, age 74, both hemispheres 81.7
Gigantocellular reticular nuclei, pars
nTPM: 140.2
2336 Male, age 61, both hemispheres 199.4
2330 Male, age 80, both hemispheres 146.6
2706 Male, age 80, both hemispheres 142.4
2084 Female, age 85, both hemispheres 114.3
2168 Male, age 76, both hemispheres 98.4
Inferior olive
nTPM: 178.8
2178 Male, age 61, both hemispheres 296.0
2085 Female, age 85, both hemispheres 162.0
2563 Male, age 74, both hemispheres 149.0
2628 Female, age 91, both hemispheres 146.0
2379 Male, age 80, both hemispheres 140.9
Kolliker-Fuse nucleus
nTPM: 116.0
2793 Female, age 91, left hemisphere 160.8
2163 Male, age 80, both hemispheres 115.5
2315 Male, age 76, right hemisphere 71.6
Lateral lemniscal nuclei
nTPM: 113.0
2320 Female, age 91, left hemisphere 146.5
2453 Male, age 74, right hemisphere 110.6
2746 Female, age 85, left hemisphere 109.1
2169 Male, age 76, both hemispheres 106.3
2036 Male, age 80, both hemispheres 92.5
Lateral medullary reticular nucleus
nTPM: 182.0
2374 Male, age 61, both hemispheres 250.6
2852 Male, age 80, both hemispheres 212.9
2305 Male, age 74, both hemispheres 207.5
2190 Female, age 85, both hemispheres 163.8
2804 Female, age 91, both hemispheres 133.7
2044 Male, age 76, both hemispheres 123.5
Lateral parabrachial nucleus
nTPM: 124.1
2792 Male, age 76, both hemispheres 160.7
2013 Male, age 80, both hemispheres 135.8
2790 Male, age 61, both hemispheres 126.6
2139 Female, age 85, right hemisphere 73.3
Lateral vestibular nucleus
nTPM: 142.5
2311 Male, age 80, both hemispheres 168.1
2184 Male, age 76, both hemispheres 116.9
Locus coeruleus
nTPM: 56.8
2162 Male, age 80, both hemispheres 75.0
2720 Male, age 74, both hemispheres 70.3
2123 Female, age 91, both hemispheres 59.5
2317 Female, age 72, unknown 59.0
2014 Male, age 55, unknown 48.9
2788 Male, age 74, unknown 45.9
1980 Male, age 76, both hemispheres 38.9
Medial olivary nucleus
nTPM: 215.0
1943 Male, age 61, both hemispheres 335.1
1962 Male, age 76, both hemispheres 220.0
2851 Male, age 80, both hemispheres 159.7
2138 Female, age 91, both hemispheres 145.4
Medial parabrachial nucleus
nTPM: 147.9
2170 Female, age 91, both hemispheres 186.1
2463 Female, age 85, right hemisphere 173.8
2854 Male, age 80, both hemispheres 140.6
2156 Male, age 61, both hemispheres 125.9
2786 Male, age 76, both hemispheres 113.0
Medial periolivary nuclei
nTPM: 119.8
2458 Female, age 91, both hemispheres 150.7
2081 Male, age 80, both hemispheres 142.2
2791 Male, age 74, right hemisphere 120.8
2063 Male, age 76, both hemispheres 101.2
2171 Female, age 85, both hemispheres 84.3
Medial vestibular nucleus
nTPM: 130.1
2624 Male, age 61, both hemispheres 166.4
2801 Male, age 74, both hemispheres 162.5
2093 Male, age 80, both hemispheres 145.4
2803 Female, age 91, both hemispheres 140.4
2743 Female, age 85, both hemispheres 105.0
2134 Male, age 76, both hemispheres 61.0
Motor facial nucleus
nTPM: 135.5
2126 Male, age 61, both hemispheres 254.5
2697 Female, age 85, both hemispheres 129.9
2365 Male, age 74, right hemisphere 121.6
2795 Female, age 91, both hemispheres 113.7
2327 Male, age 80, both hemispheres 98.7
2062 Male, age 76, both hemispheres 94.9
Motor hypoglossal nucleus
nTPM: 123.3
2182 Male, age 80, both hemispheres 179.6
2125 Female, age 91, both hemispheres 159.8
2132 Female, age 85, both hemispheres 146.8
2461 Male, age 61, both hemispheres 81.9
2277 Male, age 76, both hemispheres 48.4
Motor trigeminal nucleus
nTPM: 132.0
2321 Female, age 91, both hemispheres 163.0
2335 Male, age 61, both hemispheres 143.8
2560 Male, age 74, both hemispheres 143.2
2309 Male, age 76, both hemispheres 111.2
2079 Male, age 80, both hemispheres 99.0
Nuclei of the trapezoid body
nTPM: 114.0
2166 Male, age 80, both hemispheres 144.4
2159 Male, age 61, both hemispheres 134.8
2368 Female, age 91, both hemispheres 123.9
1983 Male, age 76, both hemispheres 94.4
2735 Female, age 85, both hemispheres 72.4
Nucleus ambiguus
nTPM: 182.4
2071 Male, age 76, both hemispheres 205.1
2096 Female, age 85, both hemispheres 159.7
Nucleus cuneatus
nTPM: 162.8
2808 Female, age 85, both hemispheres 216.4
2380 Male, age 80, both hemispheres 205.1
2100 Male, age 76, both hemispheres 189.9
2564 Male, age 74, both hemispheres 135.8
2805 Female, age 91, both hemispheres 129.4
2562 Male, age 61, both hemispheres 100.0
Nucleus gracilis
nTPM: 177.6
2382 Male, age 80, both hemispheres 229.7
2299 Female, age 85, both hemispheres 155.3
2627 Male, age 74, both hemispheres 147.7
Nucleus raphe magnus
nTPM: 99.9
2459 Female, age 91, both hemispheres 129.5
2328 Male, age 80, both hemispheres 119.3
2051 Male, age 76, both hemispheres 111.6
2455 Male, age 74, both hemispheres 96.6
2160 Male, age 61, both hemispheres 76.0
2172 Female, age 85, both hemispheres 66.3
Nucleus raphe obscurus
nTPM: 270.8
2800 Male, age 61, midline 321.9
2845 Female, age 85, midline 276.7
2142 Male, age 76, midline 213.8
Nucleus raphe pallidus
nTPM: 203.9
1924 Male, age 61, midline 241.5
2145 Male, age 76, midline 222.2
2183 Male, age 80, midline 148.0
Nucleus tractus solitarii
nTPM: 54.8
2307 Male, age 80, both hemispheres 67.8
2656 Male, age 76, both hemispheres 61.9
2191 Female, age 85, both hemispheres 49.6
2144 Female, age 91, right hemisphere 39.8
Paramedian reticular nucleus
nTPM: 123.0
2057 Male, age 80, both hemispheres 141.4
2050 Female, age 85, both hemispheres 117.5
2052 Male, age 76, both hemispheres 116.9
2313 Male, age 61, both hemispheres 116.4
Parvicellular reticular nuclei
nTPM: 134.2
2095 Male, age 76, both hemispheres 149.2
2119 Male, age 80, both hemispheres 147.4
2558 Male, age 74, both hemispheres 105.9
Parvicellular reticular nuclei, medullary
nTPM: 106.3
2189 Female, age 91, both hemispheres 124.0
2181 Male, age 80, left hemisphere 97.6
2091 Female, age 85, both hemispheres 97.3
Peritrigeminal nucleus
nTPM: 164.9
2179 Male, age 61, both hemispheres 201.0
2067 Female, age 85, both hemispheres 154.8
2136 Male, age 76, both hemispheres 138.9
Pontine nuclei
nTPM: 134.4
2454 Male, age 74, left hemisphere 181.9
2319 Female, age 91, both hemispheres 159.1
2109 Female, age 72, unknown 155.1
1968 Male, age 76, left hemisphere 134.9
2115 Male, age 80, left hemisphere 128.3
1863 Male, age 55, unknown 113.9
2727 Male, age 61, right hemisphere 109.9
2787 Female, age 85, both hemispheres 91.8
Pontine raphe nucleus
nTPM: 81.9
2122 Female, age 85, midline 87.1
2853 Male, age 76, midline 76.8
Posteroventral cochlear nucleus
nTPM: 141.5
2341 Male, age 80, both hemispheres 172.8
2135 Female, age 91, both hemispheres 162.4
2371 Male, age 61, both hemispheres 147.3
2070 Male, age 76, both hemispheres 133.2
2752 Female, age 85, both hemispheres 92.1
Prepositus hypoglossal nucleus
nTPM: 136.8
2855 Female, age 85, right hemisphere 186.4
2086 Male, age 80, both hemispheres 87.2
Principal sensory trigeminal nucleus
nTPM: 119.3
2367 Female, age 91, left hemisphere 156.4
2158 Male, age 61, both hemispheres 111.9
2324 Male, age 76, both hemispheres 109.1
2008 Male, age 80, left hemisphere 99.7
Reticular pontine nucleus, caudal
nTPM: 138.2
2559 Male, age 74, both hemispheres 172.5
2457 Female, age 91, both hemispheres 156.8
2092 Male, age 76, both hemispheres 123.3
2332 Male, age 80, right hemisphere 100.4
Reticular pontine nucleus, oral
nTPM: 142.4
2361 Male, age 74, both hemispheres 164.9
2366 Female, age 91, both hemispheres 148.3
1939 Male, age 80, both hemispheres 144.0
2167 Male, age 76, both hemispheres 127.6
2012 Female, age 85, both hemispheres 127.3
Reticulotegmental nucleus
nTPM: 113.0
2322 Female, age 91, both hemispheres 143.9
2452 Male, age 74, both hemispheres 120.5
2333 Male, age 80, both hemispheres 114.2
2325 Male, age 76, both hemispheres 73.2
Spinal trigeminal nucleus, caudal
nTPM: 166.0
2312 Male, age 61, both hemispheres 265.8
2308 Male, age 80, both hemispheres 167.2
2447 Male, age 76, both hemispheres 166.9
2642 Male, age 74, both hemispheres 115.5
2390 Female, age 91, both hemispheres 114.8
Spinal trigeminal nucleus, interpolar
nTPM: 95.5
2033 Male, age 80, both hemispheres 108.0
2386 Female, age 85, both hemispheres 106.7
2389 Female, age 91, both hemispheres 99.4
2066 Male, age 76, right hemisphere 89.9
2625 Male, age 61, both hemispheres 73.5
Spinal trigeminal nucleus, oral
nTPM: 116.1
2164 Male, age 80, both hemispheres 148.3
1978 Male, age 76, both hemispheres 108.9
2737 Female, age 85, both hemispheres 91.0
Spinal vestibular nucleus
nTPM: 135.6
2748 Male, age 76, both hemispheres 170.3
2806 Female, age 85, both hemispheres 146.9
2384 Male, age 74, both hemispheres 131.5
2780 Male, age 80, both hemispheres 125.5
2186 Female, age 91, both hemispheres 122.9
2796 Male, age 61, both hemispheres 116.6
Subcoeruleus area
nTPM: 125.1
2369 Female, age 85, left hemisphere 215.1
2089 Male, age 76, left hemisphere 116.6
1958 Male, age 80, both hemispheres 113.6
2451 Male, age 74, both hemispheres 91.0
2323 Female, age 91, left hemisphere 89.4
Superior olive
nTPM: 126.0
2329 Male, age 80, right hemisphere 147.7
2020 Male, age 76, both hemispheres 138.3
2561 Female, age 91, both hemispheres 126.3
2364 Male, age 74, right hemisphere 122.1
1875 Female, age 85, both hemispheres 95.8
Superior vestibular nucleus
nTPM: 106.4
2015 Male, age 80, both hemispheres 128.9
2061 Male, age 76, both hemispheres 114.9
2383 Male, age 74, both hemispheres 75.5
Ventral medullary reticular nucleus
nTPM: 199.3
2372 Male, age 61, both hemispheres 242.3
2060 Male, age 76, both hemispheres 156.2
Ventral periolivary nuclei
nTPM: 104.2
2023 Male, age 76, both hemispheres 138.6
2165 Male, age 80, both hemispheres 111.9
2794 Female, age 91, left hemisphere 96.1
2130 Female, age 85, both hemispheres 70.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 159.5
2180 Male, age 61, both hemispheres 237.7
2118 Male, age 80, both hemispheres 179.5
1986 Male, age 76, both hemispheres 129.8
2741 Female, age 85, both hemispheres 128.3
2302 Female, age 91, both hemispheres 122.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 131.4
2456 Female, age 91, both hemispheres 155.4
2359 Male, age 61, both hemispheres 153.3
2840 Female, age 85, both hemispheres 127.5
1959 Male, age 76, both hemispheres 121.2
2161 Male, age 80, both hemispheres 119.4
2449 Male, age 74, both hemispheres 111.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 410.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 410.7
FF:10182-103D2 60 years, female 479.5
FF:10165-103B3 76 years, female 341.8
Medulla oblongata
Scaled Tags Per Million: 351.2
FF:10038-101F2 18-64 years, mixed 481.2
FF:10174-103C3 60 years, female 337.8
FF:10155-103A2 76 years, female 234.6
Pons
Scaled Tags Per Million: 313.8
FF:10033-101E6 18-54 years, mixed 313.8

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 183.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 183.7
Samples: 4

Max nTPM: 196.6
Min nTPM: 164.3
Sample A Female 177.2
Sample B Female 164.3
Sample C Male 196.6
Sample D Male 196.5
Pons
nTPM: 99.5
Samples: 4

Max nTPM: 164.1
Min nTPM: 52.4
Sample A Female 52.4
Sample B Female 87.7
Sample C Male 93.7
Sample D Male 164.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 8.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.1
Sample A Male 11.0
Sample B Male 6.1
Sample C Female 10.1
Sample D Female 7.6

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.3
71529905 Antisense, RP_050915_01_C04, Mouse strain C57BL/6J (56 days, male) 0.3
Pons
Expression energy: 0.2
71529905 Antisense, RP_050915_01_C04, Mouse strain C57BL/6J (56 days, male) 0.2

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