HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:66.1 nTPM
HPA:66.1 nTPM
GTEx:63.6 nTPM
FANTOM5:205.3 Scaled Tags Per Million
Pig:84.8 nTPM
Mouse:186.7 nTPM
Allen mouse:18.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048116
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.1
Sample id Sample description nTPM
Hippocampus
nTPM: 52.2
1898 Male, age 80, left hemisphere 63.9
2621 Female, age 67, right hemisphere 57.5
1855 Male, age 76, left hemisphere 57.0
1911 Female, age 85, right hemisphere 46.6
2529 Female, age 94, left hemisphere 44.3
2148 Female, age 91, left hemisphere 44.1
Dentate gyrus
nTPM: 54.6
2010 Male, age 76, both hemispheres 63.8
2530 Female, age 94, left hemisphere 61.3
1927 Female, age 91, both hemispheres 57.0
2246 Female, age 85, both hemispheres 51.5
2528 Male, age 74, both hemispheres 49.7
2531 Female, age 67, both hemispheres 44.3
Entorhinal gyrus
nTPM: 55.1
2764 Male, age 80, right hemisphere 60.3
1787 Male, age 76, left hemisphere 59.4
1938 Female, age 85, left hemisphere 58.6
2613 Female, age 94, left hemisphere 54.6
2117 Female, age 91, right hemisphere 52.2
2686 Male, age 75, right hemisphere 45.8
Hippocampus, CA1
nTPM: 61.0
2749 Male, age 80, left hemisphere 97.0
1873 Female, age 85, both hemispheres 57.7
2045 Male, age 76, both hemispheres 55.0
2527 Male, age 74, both hemispheres 50.2
2082 Female, age 91, right hemisphere 45.0
Hippocampus, CA2
nTPM: 54.5
1892 Male, age 76, both hemispheres 73.3
1963 Male, age 80, left hemisphere 63.4
2249 Male, age 74, both hemispheres 52.5
1940 Female, age 85, left hemisphere 51.8
2113 Female, age 91, right hemisphere 44.1
2437 Female, age 94, left hemisphere 42.1
Hippocampus, CA3
nTPM: 54.5
2137 Male, age 80, left hemisphere 73.7
1867 Male, age 76, both hemispheres 62.1
2620 Female, age 94, left hemisphere 58.8
1891 Female, age 85, both hemispheres 51.5
2436 Male, age 74, both hemispheres 43.6
2861 Female, age 67, both hemispheres 37.4
Parahippocampal cortex
nTPM: 51.5
1850 Male, age 80, both hemispheres 73.4
1990 Female, age 91, right hemisphere 54.6
2532 Female, age 72, left hemisphere 53.8
2693 Female, age 94, both hemispheres 53.5
1933 Female, age 85, both hemispheres 50.9
2018 Male, age 76, both hemispheres 49.9
2250 Female, age 67, right hemisphere 49.4
2245 Female, age 91, both hemispheres 46.8
2692 Male, age 74, both hemispheres 45.9
2622 Female, age 67, right hemisphere 36.9
Perirhinal gyrus
nTPM: 66.1
1794 Male, age 80, right hemisphere 76.1
1847 Female, age 91, left hemisphere 67.1
1841 Female, age 85, right hemisphere 64.7
2521 Female, age 94, right hemisphere 64.1
2848 Male, age 76, right hemisphere 58.5
Subiculum
nTPM: 51.5
1901 Male, age 80, both hemispheres 60.3
1977 Female, age 85, both hemispheres 59.5
2042 Male, age 76, both hemispheres 52.9
2438 Female, age 94, left hemisphere 48.1
2619 Male, age 74, both hemispheres 45.4
2729 Female, age 91, right hemisphere 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.6
Samples: 197

Max nTPM: 114.2
Min nTPM: 24.2
Std nTPM: 12.4
Median nTPM: 62.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 114.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 103.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 93.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 93.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 89.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 87.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 87.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 86.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 86.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 85.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 205.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 205.3
FF:10169-103B7 60 years, female 245.8
FF:10153-102I9 76 years, female 164.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 84.9
Samples: 4

Max nTPM: 107.6
Min nTPM: 62.7
Sample A Female 107.6
Sample B Female 84.9
Sample C Male 84.3
Sample D Male 62.7
Entorhinal cortex
nTPM: 75.7
Samples: 4

Max nTPM: 83.4
Min nTPM: 64.3
Sample A Female 83.4
Sample B Female 74.9
Sample C Male 80.2
Sample D Male 64.3
Subiculum
nTPM: 77.5
Samples: 4

Max nTPM: 92.5
Min nTPM: 70.4
Sample A Female 92.5
Sample B Female 72.4
Sample C Male 70.4
Sample D Male 74.8
Ventral hippocampus
nTPM: 73.7
Samples: 4

Max nTPM: 85.4
Min nTPM: 52.8
Sample A Female 74.0
Sample B Female 52.8
Sample C Male 85.4
Sample D Male 82.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 186.7
Samples: 4

Max nTPM: 205.4
Min nTPM: 172.6
Sample A Male 172.6
Sample B Male 184.1
Sample C Female 184.7
Sample D Female 205.4
Hippocampal formation
nTPM: 162.0
Samples: 4

Max nTPM: 174.0
Min nTPM: 151.8
Sample A Male 165.7
Sample B Male 151.8
Sample C Female 174.0
Sample D Female 156.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.3
71616360 Antisense, RP_050927_02_G05, Mouse strain C57BL/6J (56 days, male) 18.3

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