HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:184.5 nTPM
HPA:184.5 nTPM
GTEx:152.5 nTPM
FANTOM5:101.5 Scaled Tags Per Million
Pig:79.3 nTPM
Mouse:89.4 nTPM
Allen mouse:17.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022034Antibody HPA022901
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.5
Sample id Sample description nTPM
Hippocampus
nTPM: 172.2
2148 Female, age 91, left hemisphere 200.8
1855 Male, age 76, left hemisphere 187.2
2529 Female, age 94, left hemisphere 163.7
2621 Female, age 67, right hemisphere 163.1
1911 Female, age 85, right hemisphere 161.1
1898 Male, age 80, left hemisphere 157.2
Dentate gyrus
nTPM: 167.9
2531 Female, age 67, both hemispheres 191.0
1927 Female, age 91, both hemispheres 183.1
2528 Male, age 74, both hemispheres 168.5
2246 Female, age 85, both hemispheres 162.9
2010 Male, age 76, both hemispheres 154.5
2530 Female, age 94, left hemisphere 147.7
Entorhinal gyrus
nTPM: 158.2
2686 Male, age 75, right hemisphere 174.7
2613 Female, age 94, left hemisphere 161.1
1938 Female, age 85, left hemisphere 160.5
2764 Male, age 80, right hemisphere 156.9
1787 Male, age 76, left hemisphere 155.1
2117 Female, age 91, right hemisphere 140.9
Hippocampus, CA1
nTPM: 184.5
2045 Male, age 76, both hemispheres 215.9
2749 Male, age 80, left hemisphere 208.7
1873 Female, age 85, both hemispheres 175.4
2082 Female, age 91, right hemisphere 169.3
2527 Male, age 74, both hemispheres 153.5
Hippocampus, CA2
nTPM: 156.3
1963 Male, age 80, left hemisphere 182.4
2113 Female, age 91, right hemisphere 161.0
1940 Female, age 85, left hemisphere 154.1
2437 Female, age 94, left hemisphere 151.1
1892 Male, age 76, both hemispheres 149.7
2249 Male, age 74, both hemispheres 139.3
Hippocampus, CA3
nTPM: 182.3
2137 Male, age 80, left hemisphere 236.2
2620 Female, age 94, left hemisphere 197.6
2861 Female, age 67, both hemispheres 185.5
1891 Female, age 85, both hemispheres 163.4
1867 Male, age 76, both hemispheres 161.4
2436 Male, age 74, both hemispheres 150.0
Parahippocampal cortex
nTPM: 157.1
2245 Female, age 91, both hemispheres 174.2
2018 Male, age 76, both hemispheres 165.8
2692 Male, age 74, both hemispheres 161.8
2622 Female, age 67, right hemisphere 161.5
1850 Male, age 80, both hemispheres 159.7
2693 Female, age 94, both hemispheres 158.4
1933 Female, age 85, both hemispheres 157.1
2532 Female, age 72, left hemisphere 153.5
1990 Female, age 91, right hemisphere 148.0
2250 Female, age 67, right hemisphere 131.4
Perirhinal gyrus
nTPM: 151.1
1847 Female, age 91, left hemisphere 158.4
1794 Male, age 80, right hemisphere 155.9
1841 Female, age 85, right hemisphere 152.1
2521 Female, age 94, right hemisphere 149.9
2848 Male, age 76, right hemisphere 139.3
Subiculum
nTPM: 163.2
2729 Female, age 91, right hemisphere 179.2
1901 Male, age 80, both hemispheres 170.7
2438 Female, age 94, left hemisphere 170.4
2042 Male, age 76, both hemispheres 165.0
2619 Male, age 74, both hemispheres 147.7
1977 Female, age 85, both hemispheres 146.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 152.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 152.5
Samples: 197

Max nTPM: 237.0
Min nTPM: 93.5
Std nTPM: 30.6
Median nTPM: 151.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 237.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 236.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 232.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 231.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 228.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 224.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 217.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 216.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 212.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 209.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 208.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.5
FF:10153-102I9 76 years, female 114.0
FF:10169-103B7 60 years, female 88.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.8
Samples: 4

Max nTPM: 93.4
Min nTPM: 59.5
Sample A Female 93.4
Sample B Female 86.5
Sample C Male 59.5
Sample D Male 67.9
Entorhinal cortex
nTPM: 67.5
Samples: 4

Max nTPM: 77.4
Min nTPM: 61.1
Sample A Female 68.8
Sample B Female 61.1
Sample C Male 77.4
Sample D Male 62.5
Subiculum
nTPM: 62.1
Samples: 4

Max nTPM: 80.3
Min nTPM: 51.5
Sample A Female 80.3
Sample B Female 51.5
Sample C Male 65.0
Sample D Male 51.6
Ventral hippocampus
nTPM: 79.3
Samples: 4

Max nTPM: 108.4
Min nTPM: 53.9
Sample A Female 63.8
Sample B Female 53.9
Sample C Male 91.0
Sample D Male 108.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.9
Samples: 4

Max nTPM: 92.0
Min nTPM: 85.6
Sample A Male 87.6
Sample B Male 85.6
Sample C Female 86.4
Sample D Female 92.0
Hippocampal formation
nTPM: 89.5
Samples: 4

Max nTPM: 100.4
Min nTPM: 82.3
Sample A Male 82.3
Sample B Male 91.5
Sample C Female 100.4
Sample D Female 83.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.1
68844235 Antisense, RP_050222_01_B09, Mouse strain C57BL/6J (56 days, male) 17.1

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