We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
BEX2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • BEX2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:117.7 nTPM
HPA:117.7 nTPM
GTEx:87.9 nTPM
FANTOM5:245.8 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 117.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 112.2
2565 Male, age 75, midline 114.2
2194 Female, age 79, both hemispheres 113.5
1981 Female, age 72, midline 113.2
2816 Male, age 47, midline 110.3
2048 Male, age 55, midline 109.8
Cervical spinal cord, dorsal horn
nTPM: 117.7
2721 Male, age 90, both hemispheres 122.1
2069 Male, age 47, both hemispheres 120.8
2297 Male, age 75, both hemispheres 120.5
1877 Male, age 55, unknown 118.8
2296 Male, age 66, both hemispheres 112.5
2173 Female, age 72, unknown 111.4
Cervical spinal cord, ventral horn
nTPM: 109.2
2480 Male, age 75, both hemispheres 114.3
2068 Male, age 55, unknown 112.7
2295 Male, age 66, both hemispheres 107.5
2820 Female, age 79, both hemispheres 107.5
2098 Female, age 72, unknown 107.0
2809 Male, age 90, both hemispheres 106.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 87.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 87.9
Samples: 159

Max nTPM: 230.0
Min nTPM: 43.1
Std nTPM: 30.2
Median nTPM: 80.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 230.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 197.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 181.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 161.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 159.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 156.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 153.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 147.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 147.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 136.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 134.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 130.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 129.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 129.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 125.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 123.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 122.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 121.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 120.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 119.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 118.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 116.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 116.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 115.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 114.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 114.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 114.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 114.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 113.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 112.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 111.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 110.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 110.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 110.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 108.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 107.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 107.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 105.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 105.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 104.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 103.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 103.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 103.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 102.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 101.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 101.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 101.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 100.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 99.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 98.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 96.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 95.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 95.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 93.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 93.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 92.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 92.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 92.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 91.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 89.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 88.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 88.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 88.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 87.9
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 87.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 87.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 86.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 86.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 86.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 85.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 85.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 85.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 85.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 85.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 84.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 82.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 82.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 81.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 80.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 80.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 80.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 80.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 80.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 79.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 79.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 78.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 78.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 77.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 77.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 76.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 76.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 75.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 75.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 75.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 74.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 74.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 73.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 72.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 71.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 71.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 71.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 71.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 71.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 71.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 70.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 70.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 69.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 69.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 68.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 68.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 68.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 68.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 68.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 68.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 67.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 67.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 67.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 67.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 67.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 67.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 66.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 66.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 66.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 66.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 64.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 64.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 63.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 63.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 63.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 62.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 61.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 61.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 61.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 61.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 60.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 60.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 59.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 58.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 58.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 58.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 58.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 58.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 57.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 57.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 56.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 56.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 56.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 56.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 54.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 54.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 52.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 52.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 50.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 49.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 48.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 47.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 46.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 44.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 43.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 245.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 245.8
FF:10181-103D1 60 years, female 322.0
FF:10159-103A6 76 years, female 169.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.