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TCEAL4
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:163.8 nTPM
HPA:163.8 nTPM
FANTOM5:364.7 Scaled Tags Per Million

PONS - Annotated protein expression
Pending normal tissue analysis

PONS - HPA Brain RNA-seq
Max nTPM 163.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 160.6
2301 Female, age 85, both hemispheres 171.5
2188 Female, age 91, both hemispheres 164.8
2090 Male, age 80, both hemispheres 155.6
1984 Male, age 76, both hemispheres 150.2
Dorsal cochlear nucleus
nTPM: 157.7
2370 Male, age 61, both hemispheres 160.1
2378 Male, age 80, both hemispheres 160.0
2187 Female, age 91, both hemispheres 159.5
2802 Male, age 74, right hemisphere 156.8
2058 Male, age 76, both hemispheres 152.0
Dorsal tegmental nucleus
nTPM: 160.0
2358 Male, age 61, both hemispheres 171.2
2083 Male, age 80, both hemispheres 161.2
2326 Male, age 74, both hemispheres 156.1
1936 Male, age 76, left hemisphere 151.6
Dorsolateral tegmental area
nTPM: 154.3
2654 Male, age 80, both hemispheres 157.0
2751 Female, age 85, both hemispheres 156.5
2141 Male, age 76, both hemispheres 154.1
2360 Male, age 74, both hemispheres 152.0
2337 Male, age 61, both hemispheres 151.7
Kolliker-Fuse nucleus
nTPM: 160.1
2793 Female, age 91, left hemisphere 173.1
2163 Male, age 80, both hemispheres 156.1
2315 Male, age 76, right hemisphere 151.0
Lateral lemniscal nuclei
nTPM: 156.8
2453 Male, age 74, right hemisphere 167.7
2169 Male, age 76, both hemispheres 166.1
2320 Female, age 91, left hemisphere 157.5
2746 Female, age 85, left hemisphere 156.0
2036 Male, age 80, both hemispheres 136.9
Lateral parabrachial nucleus
nTPM: 153.6
2792 Male, age 76, both hemispheres 156.8
2139 Female, age 85, right hemisphere 156.4
2013 Male, age 80, both hemispheres 151.9
2790 Male, age 61, both hemispheres 149.3
Lateral vestibular nucleus
nTPM: 159.1
2184 Male, age 76, both hemispheres 159.3
2311 Male, age 80, both hemispheres 158.9
Locus coeruleus
nTPM: 154.5
2720 Male, age 74, both hemispheres 164.2
2788 Male, age 74, unknown 160.1
2123 Female, age 91, both hemispheres 155.5
2162 Male, age 80, both hemispheres 152.4
1980 Male, age 76, both hemispheres 151.1
2014 Male, age 55, unknown 150.7
2317 Female, age 72, unknown 147.4
Medial olivary nucleus
nTPM: 159.3
2851 Male, age 80, both hemispheres 167.2
1962 Male, age 76, both hemispheres 159.1
2138 Female, age 91, both hemispheres 156.3
1943 Male, age 61, both hemispheres 154.6
Medial parabrachial nucleus
nTPM: 156.2
2854 Male, age 80, both hemispheres 164.4
2170 Female, age 91, both hemispheres 163.7
2786 Male, age 76, both hemispheres 153.0
2156 Male, age 61, both hemispheres 152.0
2463 Female, age 85, right hemisphere 148.2
Medial periolivary nuclei
nTPM: 161.1
2458 Female, age 91, both hemispheres 171.7
2171 Female, age 85, both hemispheres 165.1
2063 Male, age 76, both hemispheres 162.2
2081 Male, age 80, both hemispheres 154.7
2791 Male, age 74, right hemisphere 151.6
Motor facial nucleus
nTPM: 163.8
2697 Female, age 85, both hemispheres 176.5
2327 Male, age 80, both hemispheres 168.1
2365 Male, age 74, right hemisphere 164.2
2062 Male, age 76, both hemispheres 161.0
2795 Female, age 91, both hemispheres 158.6
2126 Male, age 61, both hemispheres 154.4
Motor trigeminal nucleus
nTPM: 157.3
2321 Female, age 91, both hemispheres 162.5
2079 Male, age 80, both hemispheres 159.9
2309 Male, age 76, both hemispheres 155.4
2335 Male, age 61, both hemispheres 154.7
2560 Male, age 74, both hemispheres 154.2
Nuclei of the trapezoid body
nTPM: 162.5
2166 Male, age 80, both hemispheres 165.1
2368 Female, age 91, both hemispheres 164.4
1983 Male, age 76, both hemispheres 164.0
2159 Male, age 61, both hemispheres 161.9
2735 Female, age 85, both hemispheres 157.2
Paramedian reticular nucleus
nTPM: 154.6
2313 Male, age 61, both hemispheres 158.7
2057 Male, age 80, both hemispheres 154.7
2050 Female, age 85, both hemispheres 152.8
2052 Male, age 76, both hemispheres 152.2
Pontine nuclei
nTPM: 156.4
2454 Male, age 74, left hemisphere 161.6
2787 Female, age 85, both hemispheres 160.3
2319 Female, age 91, both hemispheres 157.8
1863 Male, age 55, unknown 157.0
1968 Male, age 76, left hemisphere 155.4
2115 Male, age 80, left hemisphere 153.5
2727 Male, age 61, right hemisphere 152.9
2109 Female, age 72, unknown 152.4
Pontine raphe nucleus
nTPM: 154.3
2122 Female, age 85, midline 155.2
2853 Male, age 76, midline 153.4
Posteroventral cochlear nucleus
nTPM: 158.1
2341 Male, age 80, both hemispheres 163.7
2135 Female, age 91, both hemispheres 162.2
2371 Male, age 61, both hemispheres 157.4
2752 Female, age 85, both hemispheres 154.6
2070 Male, age 76, both hemispheres 152.8
Principal sensory trigeminal nucleus
nTPM: 163.8
2367 Female, age 91, left hemisphere 175.4
2158 Male, age 61, both hemispheres 167.0
2324 Male, age 76, both hemispheres 161.6
2008 Male, age 80, left hemisphere 151.0
Reticular pontine nucleus, caudal
nTPM: 163.7
2332 Male, age 80, right hemisphere 170.0
2457 Female, age 91, both hemispheres 169.9
2092 Male, age 76, both hemispheres 158.4
2559 Male, age 74, both hemispheres 156.4
Reticular pontine nucleus, oral
nTPM: 160.9
2366 Female, age 91, both hemispheres 173.5
2361 Male, age 74, both hemispheres 163.7
2167 Male, age 76, both hemispheres 159.5
1939 Male, age 80, both hemispheres 156.6
2012 Female, age 85, both hemispheres 151.2
Reticulotegmental nucleus
nTPM: 161.9
2322 Female, age 91, both hemispheres 166.7
2452 Male, age 74, both hemispheres 164.5
2333 Male, age 80, both hemispheres 158.5
2325 Male, age 76, both hemispheres 157.9
Spinal trigeminal nucleus, oral
nTPM: 154.5
2164 Male, age 80, both hemispheres 162.2
1978 Male, age 76, both hemispheres 153.0
2737 Female, age 85, both hemispheres 148.5
Subcoeruleus area
nTPM: 155.1
1958 Male, age 80, both hemispheres 160.0
2323 Female, age 91, left hemisphere 154.6
2369 Female, age 85, left hemisphere 154.4
2451 Male, age 74, both hemispheres 153.7
2089 Male, age 76, left hemisphere 152.6
Superior olive
nTPM: 161.3
2329 Male, age 80, right hemisphere 169.3
2364 Male, age 74, right hemisphere 161.8
2561 Female, age 91, both hemispheres 160.6
1875 Female, age 85, both hemispheres 159.8
2020 Male, age 76, both hemispheres 155.1
Superior vestibular nucleus
nTPM: 154.6
2383 Male, age 74, both hemispheres 157.7
2061 Male, age 76, both hemispheres 154.8
2015 Male, age 80, both hemispheres 151.4
Ventral periolivary nuclei
nTPM: 159.9
2165 Male, age 80, both hemispheres 167.5
2130 Female, age 85, both hemispheres 159.5
2794 Female, age 91, left hemisphere 158.8
2023 Male, age 76, both hemispheres 154.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 161.6
2840 Female, age 85, both hemispheres 166.7
2449 Male, age 74, both hemispheres 164.9
2456 Female, age 91, both hemispheres 164.5
2161 Male, age 80, both hemispheres 160.3
1959 Male, age 76, both hemispheres 158.8
2359 Male, age 61, both hemispheres 154.3

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 364.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 289.0
FF:10182-103D2 60 years, female 360.3
FF:10165-103B3 76 years, female 217.7
Pons
Scaled Tags Per Million: 364.7
FF:10033-101E6 18-54 years, mixed 364.7

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