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HSPBP1
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BRAIN PUTAMEN Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
PUTAMEN - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
HPA:50.8 nTPM
GTEx:104.1 nTPM
FANTOM5:43.8 Scaled Tags Per Million
Pig:22.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Avg nTPM 50.8
Sample id Sample description nTPM
Putamen
nTPM: 50.8
2466 Female, age 79, unknown 60.9
2489 Female, age 72, unknown 54.6
1838 Male, age 80, right hemisphere 52.0
1829 Male, age 74, unknown 51.5
1937 Female, age 91, right hemisphere 49.4
2647 Male, age 75, left hemisphere 44.9
2482 Female, age 94, left hemisphere 42.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 104.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 104.1
Samples: 205

Max nTPM: 201.9
Min nTPM: 31.7
Std nTPM: 37.0
Median nTPM: 100.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 201.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 195.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 189.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 188.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 188.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 186.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 180.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 179.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 177.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 176.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 173.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 172.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 170.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 169.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 164.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 162.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 161.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 159.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 156.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 155.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 150.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 150.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 148.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 146.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 145.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 144.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 144.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 144.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 144.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 143.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 143.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 142.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 141.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 141.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 140.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 139.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 139.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 138.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 138.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 138.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 137.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 136.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 136.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 136.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 135.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 134.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 134.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 134.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 133.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 133.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 133.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 131.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 131.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 129.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 129.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 128.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 127.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 127.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 127.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 124.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 123.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 123.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 123.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 122.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 122.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 122.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 121.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 121.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 118.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 117.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 116.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 116.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 116.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 115.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 114.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 114.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 110.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 110.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 110.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 110.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 110.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 109.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 109.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 108.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 108.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 107.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 107.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 107.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 106.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 106.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 106.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 105.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 105.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 104.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 104.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 104.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 103.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 102.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 102.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 101.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 100.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 100.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 99.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 98.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 98.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 98.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 98.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 97.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 96.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 96.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 96.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 96.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 95.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 95.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 95.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 94.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 94.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 93.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 93.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 93.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 92.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 91.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 91.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 91.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 91.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 90.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 90.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 89.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 89.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 88.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 88.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 87.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 86.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 83.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 83.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 83.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 83.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 82.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 81.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 80.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 80.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 80.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 78.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 78.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 78.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 76.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 74.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 74.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 71.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 70.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 70.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 70.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 70.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 69.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 69.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 68.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 68.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 68.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 68.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 68.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 68.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 67.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 67.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 67.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 65.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 63.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 63.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 62.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 61.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 61.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 61.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 59.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 59.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 58.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 57.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 55.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 53.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 53.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 53.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 51.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 50.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 50.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 50.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 48.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 48.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 47.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 46.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 45.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 38.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 31.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 43.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 43.8
FF:10176-103C5 60 years, female 43.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.0
Pig sample Sample description nTPM
Putamen
nTPM: 22.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 18.8
Sample A Female 18.8
Sample B Female 19.5
Sample C Male 25.5
Sample D Male 24.4

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